Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02209 ATGATTCCTAGTGAGATTGATATGAGAGGTATCCAGTATCTAGCACCAGAAAACCAATTTCTTGTTCCACCTTATAATAATGATAATAATAATAATAATAATAATAACCTCAGTTGCTTGATTCATACTGAAATCCCAACCTTCCATGATAATCTAAACACCCTCTTAACCAACATACCCATCTACAGTTACAATAACAGTAACTTCCCTTGTGCATTAGGAACTGACTTTATTGTCCCTCATAATTCGTCATGCCTCAGCAGCAACTCAACAACCTCCGACGAAGCCGACGAGCTTCCGCTCAGCGTGATTGACGAGCGGAAGCAGCGGCGGATGATATCGAACCGCGAGTCGGCTCGGAGGTCGAGGATGAGGAAGCAGAAACACCTGGACGAACTCTGGTCTCAGGTTGTTAGGCTCAGAAGCGAGAATCATAACCTTATTGACAAGCTCAACAACATGTCTGAGTCACATGATAGAGTTCTTCAGGAAAATGCAAGACTCAAGGAAGAAGCTTCCGATCTCCGCCAAATGATAGCGGAGATAAGTGGAAACTCGTTTGGTTGTGTTGTCAGAGGTTTTGATTTTGACGATGACGTCGACGACGACAACAACGATAATAATGATAATGATGATGTTCCTTGCAAGAACACTACTACTACTAAAATTCTCAGAGATGAGGAAACCAAGAACCATGTTCACTAA 705 0.4227 MIPSEIDMRGIQYLAPENQFLVPPYNNDNNNNNNNNLSCLIHTEIPTFHDNLNTLLTNIPIYSYNNSNFPCALGTDFIVPHNSSCLSSNSTTSDEADELPLSVIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRSENHNLIDKLNNMSESHDRVLQENARLKEEASDLRQMIAEISGNSFGCVVRGFDFDDDVDDDNNDNNDNDDVPCKNTTTTKILRDEETKNHVH 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02209 234 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 168 IPR004827 GO:0003700|GO:0006355
Aip05g02209 234 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 228 IPR044521 -
Aip05g02209 234 Coils Coil 137 185 - -
Aip05g02209 234 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 110 125 IPR004827 GO:0003700|GO:0006355
Aip05g02209 234 Gene3D - 105 160 - -
Aip05g02209 234 Pfam bZIP transcription factor 107 165 IPR004827 GO:0003700|GO:0006355
Aip05g02209 234 PANTHER BZIP PROTEIN (ATBZIP48) 1 228 - -
Aip05g02209 234 SMART brlzneu 103 167 IPR004827 GO:0003700|GO:0006355
Aip05g02209 234 CDD bZIP_plant_GBF1 108 159 IPR045314 GO:0003700|GO:0006355
Aip05g02209 234 SUPERFAMILY Leucine zipper domain 107 156 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02209 Aip-Chr5 101380480 101381410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02209 42 200 bZIP Transcription Factor Family AT3G30530 51.705 4.44e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip05g02209 bZIP_1 8.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02209 - - aip:107641963 427.172