Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02203 ATGGACGCCACCCAAATCTATGACCCTGGCAAGACGCACGTCTGGCTCAGAACTTTTGAAACTGCAGCGCGTGCGTACGACGCAGCGGCAAGAGACATCCCTGGCGCCAAGGCTAAGACCAATGTTCCGATAGCGGTAGAGCTTCTGAACAACAGCAACAACTTCGTTCACATTAACAACAACACATGTAGCCCGAGTCAGAGTAGCACGCTTGATTCATCTTCGCGGCTGCCGCCACTGCCACTGCAATGCAACGACTTCGATTCTTCTTCTGTAGTGGACTACGAGGGCATGTCATACAAGGGGCTATTGGATCTCGACCTCATCATCGTTCCTGCTGTAAAAAATTTGTCTTTATCTACTTTAGATTAG 372 0.4973 MDATQIYDPGKTHVWLRTFETAARAYDAAARDIPGAKAKTNVPIAVELLNNSNNFVHINNNTCSPSQSSTLDSSSRLPPLPLQCNDFDSSSVVDYEGMSYKGLLDLDLIIVPAVKNLSLSTLD 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02203 123 SUPERFAMILY DNA-binding domain 7 44 IPR016177 GO:0003677
Aip05g02203 123 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 3 75 - -
Aip05g02203 123 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 75 - -
Aip05g02203 123 SMART rav1_2 4 49 IPR001471 GO:0003700|GO:0006355
Aip05g02203 123 Gene3D AP2/ERF domain 3 46 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02203 Aip-Chr5 100958776 100959304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02203 3 79 AP2-EREBP Transcription Factor Family AT3G15210 55.422 7.96e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02203 K09286 - cit:102614391 66.6254