Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02202 ATGGGTCATTTTGAGGATTATCTGCATTCTGCAGCTTTAACGATTCAAAAGAGATACCACGGGTGGAAGGGAAGAAAAGATTTTTTGAGAATATGCAACCGCATTGTAAAAGTTCAGTTACTTGTGCACACAGAATGTATTTTACTAGCAGCAAGGTCATGCTTGTCTTGTAGATGCGGTGCAAGTTTCGTAGTTGAGATTGTATCAGAAGAATTTGAAGGCAAGAGGCTACTGGAGAGGCATCGAATGGTGAATGCTGCATTGGAGGAGGAAATGAAAGAGATTCACGCTCTCTCTTTCAAGAAAGCTGTCATCCCAGAGCAGTGGAAACAGCTGCAGCAAGACTCCAACCAAGCAAATCCTGCTGCCTAG 372 0.4328 MGHFEDYLHSAALTIQKRYHGWKGRKDFLRICNRIVKVQLLVHTECILLAARSCLSCRCGASFVVEIVSEEFEGKRLLERHRMVNAALEEEMKEIHALSFKKAVIPEQWKQLQQDSNQANPAA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02202 123 Gene3D - 6 40 - -
Aip05g02202 123 Gene3D - 41 121 IPR036065 -
Aip05g02202 123 SUPERFAMILY BolA-like 56 113 IPR036065 -
Aip05g02202 123 PANTHER BOLA-LIKE PROTEIN-RELATED 56 119 IPR045115 GO:0051537|GO:0097428
Aip05g02202 123 PANTHER BNAA09G06960D PROTEIN 56 119 - -
Aip05g02202 123 Coils Coil 78 98 - -
Aip05g02202 123 Pfam BolA-like protein 58 101 IPR002634 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02202 Aip-Chr5 100461542 100462531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02202 2 39 CAMTA Transcription Factor Family AT5G64220 57.895 1.39e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02202 - K22075 ahf:112763361 121.324