Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02193 atgaACCCGGCCCCCAACCCAGTCCCCAACCCAATTGACATTCTTTCAACCCGTCCCCAACCCTTATCGAGCTACCCTCATCGAGCTCATCACATCCCTTGGTCATTCTTTCACCCTTGCTACCCTATTCGAGCTCACATCCCCGCCGTCTCCAGCACCACCCTCGCTGCGCCGTTAGCCTCCGCTCCCTCTCCGCCTTGTCTCCTCGTCGCCGTTACCAGCATCCTTACCGTCAGCGTCAGCGCCAATGACTTTCCACGTCTCTTGCTCGGTGTCGATGTCGGTCTTACCCTTGTTGAAGGAATAGTTGCTTCATTGCGTTGTTTCAGGGACTGGTATAACCTTGAGAAGTCGAAGCAGGTGAAGGCATTTTGTTGTGGAGAGTATGATGAGTGCATCGAGAAGGCGAAGGCATCTGCTGCTAATTCGAATAAGAAAGCGTTGCTCCATCCTGGTTCATTCACTTGGTTGGATTTTCTTGGCTTGGTGGAGAAATTTTACTATCTCTCTGGCAGATATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGCCACTTGGCCATCTTGAATTAGATCTTCCAGAAGCACCTACTATCAAGGCACCCCGTCTTCCTCCACTAGCTGTTGATCCATACACGAGATATGGGCCCAAAGCAGAGATAACCCACTTATTCAGGACTCCTGAAAGTAAAGTTGCTATAGAAGGGAGAGTTCAGTTTGATCTGCTCCAGGTCAGCTTCACCGGTTCGATGGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGCAAGGGTTCCTACTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGATGACAAGGGTGATTTCGTTGGCACTGCAGTTCAGGAGACTGGCATAAAGTTCAAACTTGAAGACATAGTTGATCTCACTGCTTTCTTGGATTCTTCAACAGGATGCAGATTTTTTCCCTCACCGACAGTAGACTATAAGAGACTAACCTATGAAGAAGTTGAGAACCTCTAA 1152 0.474 MNPAPNPVPNPIDILSTRPQPLSSYPHRAHHIPWSFFHPCYPIRAHIPAVSSTTLAAPLASAPSPPCLLVAVTSILTVSVSANDFPRLLLGVDVGLTLVEGIVASLRCFRDWYNLEKSKQVKAFCCGEYDECIEKAKASAANSNKKALLHPGSFTWLDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRPLGHLELDLPEAPTIKAPRLPPLAVDPYTRYGPKAEITHLFRTPESKVAIEGRVQFDLLQVSFTGSMEVGREIMHAAASSNLKQVSLELVGKSPLLIFDDADVDKAASLALLGIVYNKARVPTGRIILELPAGMLDDDKGDFVGTAVQETGIKFKLEDIVDLTAFLDSSTGCRFFPSPTVDYKRLTYEEVENL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02193 383 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 250 280 IPR016162 GO:0016491
Aip05g02193 383 Pfam Aldehyde dehydrogenase family 250 308 IPR015590 GO:0016491
Aip05g02193 383 PANTHER RIBOPHORIN II 157 239 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aip05g02193 383 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 281 308 IPR016163 GO:0016620
Aip05g02193 383 Pfam Oligosaccharyltransferase subunit Ribophorin II 157 237 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aip05g02193 383 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 157 239 - -
Aip05g02193 383 SUPERFAMILY ALDH-like 251 310 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02193 Aip-Chr5 98543847 98548982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02193 245 319 Aldehyde Dehydrogenase Gene Family AT3G24503 63.636 1.76e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02193 K12667 - ahf:112775503 437.958