Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02188 ATGGTCAATAGAGCGAGAAACTTTGACAACCTCCCCTCGCTGCGCCATTTTGAGGATTTGATGGTGACTCCCTTGGCGCTCACCGTCTATCACGGAGAGAGCGCCGGAGCTGTCACGGAGGGAGCGCCGGAGCTTCTCCCGAAAGAGAAGGATTCAGAAGGCGGCGAAGGTGGAAAGAAACAAGGACAACAAGGGAAGGCGTCAGAGGGAGAAGAACGAGCTAGCGAATCGCCTTGTGAAACTGAGTCGCAGCGCGGCGTGATGAAAAGTTCAGATAAACCTCCGAAGGGGTCAAATTCAGGAACCCTAGCTGCTGAATCACCTGTTGTGAACAATCGGAGTGATGAATTGCAGGGGAGCCCTGCTACGCCGAATATGGATGTCAAAGATGAAAGGGTTTCAATTTCTGATGGTTACAGTTGGCGGATGTATGGTCAGAAGCAAGTGAAGAGTCCCACAGGATCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTTCTGCAAAGAAGATTGAATGCAATGATGATGTGGGTCGTGTAATAGATGTTGTTTATAAAAGTCAACACAGTCATGATCCCCCACATAAGCCCAATTCTACAAGGGAAAGTTTGAGCAACTGGAACATTTATGCACTTACTCACTTTGATAGTTTTGGATTAGGTGATTGCTATGGTGCTTAA 681 0.4758 MVNRARNFDNLPSLRHFEDLMVTPLALTVYHGESAGAVTEGAPELLPKEKDSEGGEGGKKQGQQGKASEGEERASESPCETESQRGVMKSSDKPPKGSNSGTLAAESPVVNNRSDELQGSPATPNMDVKDERVSISDGYSWRMYGQKQVKSPTGSRSYYRCTHSECSAKKIECNDDVGRVIDVVYKSQHSHDPPHKPNSTRESLSNWNIYALTHFDSFGLGDCYGA 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02188 226 Pfam WRKY DNA -binding domain 137 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g02188 226 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 60 205 IPR044810 GO:0003700
Aip05g02188 226 Gene3D WRKY domain 122 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip05g02188 226 MobiDBLite consensus disorder prediction 65 79 - -
Aip05g02188 226 MobiDBLite consensus disorder prediction 38 131 - -
Aip05g02188 226 MobiDBLite consensus disorder prediction 93 121 - -
Aip05g02188 226 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip05g02188 226 ProSiteProfiles WRKY domain profile. 130 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip05g02188 226 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 60 205 - -
Aip05g02188 226 SMART WRKY_cls 135 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02188 Aip-Chr5 97698970 97702123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02188 105 218 WRKY Transcription Factor Family AT4G30935 47.826 7.42e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip05g02188 WRKY 4.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02188 - - aip:110272230 382.104