Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02174 ATGAATATCGAGAAatatttggtataCCGTCATCCAACCGGTCGTGTTTGCTGCCTCACCGCCGCCTCCTCCATCGCGCGCTACTGCCGGCCTGGAACCGCCGCCACCGCGCCTTGCTGTCACGACCTAACCACATCGCCGCCGATCCGTGACGCTGCCTCCAAAACCGCACGAAGGACAGAGGGAGGAGAGAGAGAGAGAGAGTTCGCGTCGAAGGAGAGAGGGAGCTCATGCCTCACCGCCATCACCCATGGAGCCACGAGCTGCGCCGGTCGCCACCGCGTCGCGTCGGAGAGGAAGCCTGAGACTGAGCGCCGCTGGGAGAGAGGAAGACACGGGCTGGAGGAGCTGCATCCAGTCGCCGCTGTCGCGCCACTGACCGCCGTTGTTCCGCCGTCGCTGATGGTggcggaaattggcgaGAGAGAGGAGACCGGCGTGCGTGAAGAAGAAGGGGAGAGGTCTGAGGCTGAGATGGTTCACGTCACTGCCGTTCTGATTCTGCCGCAGCTTGTCCAGGGTTCCTGCTCATCCCTGTTCTCTGTTCAGCCTTCGCCAGAGCGCTGTCATCGGATAAACACTACTAAAACCGGGCCAAATTCACCAGTAATGCTACTTATTGTGGTTgctgccattctgatttctgtgggtttcaacattgagCTAACCCTTCTTCATTGTGCTCGCCTTAACCCCTGCCCTCACCGCGACGATAACACTCCAACAAAGAACGACGAAGCCCTCCCTTCCGCGCTGCCACTCGCTTCCTGCTTCTTCACTTCCGTGAAGAACGACGAAGCCCTCCCTTCCGCGCTGCCGCTCGCTTCCTGCTTCTTCGCTTCCGTGAAGAACGACGAAGTCCTAACATCTGACGAGGTGGAAAAGCGCCAGTTCCAGCTTCGAAGAAGGCTAACCATCCTAAGCAGTTCGGGATCAGAGGAGCAAAGGAAGAAAAGGATCCTCAAGCAGAGGTTGAAGGCTCCACCAGCTTTGAACCAGTTCACCAAGACCCTTGACAAGAACCTAGTTTCACCCAAGGCACCTAAACTAAAGCCAATAGCAGGTTTGTCAATTCCATTTTGTTCAATAGGGAAACAAAGCCCTAGTTCTTGGTCATTAATTGAGCCAAGTTCATTCAAAGTCAGAGGGAAAAACTGCTTTAGGGACAAGAAGAAAGAATTTGCGCCAACCAATGCTGCTTTCTATTCCCTTGGAGCAGACCTCTTTCTGTCTCAGCTCAAAATTGAACATATTGCGCGCTTTTTAGGAGTTCCTTCTATCAGCATACCTGGGGATGGTCCTTCTATTCTTATTGTAAATATTCAGGTAGCTGTATATTTCCTAGTCTAG 1350 0.5148 MNIEKYLVYRHPTGRVCCLTAASSIARYCRPGTAATAPCCHDLTTSPPIRDAASKTARRTEGGEREREFASKERGSSCLTAITHGATSCAGRHRVASERKPETERRWERGRHGLEELHPVAAVAPLTAVVPPSLMVAEIGEREETGVREEEGERSEAEMVHVTAVLILPQLVQGSCSSLFSVQPSPERCHRINTTKTGPNSPVMLLIVVAAILISVGFNIELTLLHCARLNPCPHRDDNTPTKNDEALPSALPLASCFFTSVKNDEALPSALPLASCFFASVKNDEVLTSDEVEKRQFQLRRRLTILSSSGSEEQRKKRILKQRLKAPPALNQFTKTLDKNLVSPKAPKLKPIAGLSIPFCSIGKQSPSSWSLIEPSSFKVRGKNCFRDKKKEFAPTNAAFYSLGADLFLSQLKIEHIARFLGVPSISIPGDGPSILIVNIQVAVYFLV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02174 449 PANTHER PLANT/F14N23-31 PROTEIN 296 446 - -
Aip05g02174 449 MobiDBLite consensus disorder prediction 46 74 - -
Aip05g02174 449 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 371 443 IPR009769 -
Aip05g02174 449 Gene3D - 313 352 IPR029064 -
Aip05g02174 449 PANTHER CW14 PROTEIN 296 446 - -
Aip05g02174 449 MobiDBLite consensus disorder prediction 54 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02174 Aip-Chr5 95418271 95426585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02174 315 344 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 86.667 1.44e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02174 - - ahf:112783156 168.318