Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02164 ATGAACCCAAGGGAGAAGGAGGAGGTCTGTTCTCGCACCGTCCTGCTCTGCACCCAGATCTCACTTCGCGTAGTCATGGTCTTCCCCGCAGTCACAGTCGCAATCGCCCTCTACGCAGTTTGTAGCTGCCATCATCCTCCGCGCAGTTCCCACCTGCTCACGGAGTATTATGGGAGTGGAGAGACAAAGAAAGTGTCATGGAGAGAATCACAACTCAAAGGGTTGCGTCGTTTTCTCATTGAAAAAGAAGAAGATATTTTGAAGGCATTAATGCTCGACTTAGGAAAGCATCAAGTTGAAGCTTTTAGAGATGAGGCTAAATTGCCACAAATAGCACTGCTTAGTAGTGCAGAAATTGTTCCTGAACCTCTGGGCCTAGTCGTCATTATTTCATCTTGGAATTTCCCCTTTGGTTTATCCTTGGAGCCACTAATAGGAGCAGTAGCAGCTGGAAACACAGTGGTCTTAAAGCCTTCAGAGTTGTCACCAGCATGTTCTTCCATACTTGTCCTTGGACTTCCCAATTTCTTGGACCTCCCAATCATAAGGAAGCAATCTTCAGAGTGCGATCCTAGTGCTTTGGAAGATGCACTTTGTAAGCGTGTGATGATTACCCCAGAGGAAGTTATTAAAAGAAGTCTTGATCCTCTTGGTGCAACGGTTAGCAGGGATGGTTTAGCCAAAACACTATATTCTTGTTTATTTGACTGGTTAGTCCAAAAAATCAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGAATAACAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACATTTCAACCAGCATGTGTTTAAGATGGAACAAGAGAGATATACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTGGATAATCAAGATGTACTTGATCTAATTGAAAAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGTATGTTTCCCAAGTCGACCCATGAGACATTTGCAACAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATAAAGCCAAAACTGGCACGGTCAGACTTCACTGTTGTACATTATGCAGGCGAGGTCCAATATCAGTCTGAGCAGTTTCTTGACAAAAACAAAGACTACGTTGTTCCTGAACATCAAGACATGCTAAGTACTTCGAGATGA 1224 0.4232 MNPREKEEVCSRTVLLCTQISLRVVMVFPAVTVAIALYAVCSCHHPPRSSHLLTEYYGSGETKKVSWRESQLKGLRRFLIEKEEDILKALMLDLGKHQVEAFRDEAKLPQIALLSSAEIVPEPLGLVVIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSELSPACSSILVLGLPNFLDLPIIRKQSSECDPSALEDALCKRVMITPEEVIKRSLDPLGATVSRDGLAKTLYSCLFDWLVQKINVSIGQDPESKCLIGVLDIYGFESFKNNSFEQFCINFTNEKLQQHFNQHVFKMEQERYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFATKLYQTFKDHKRFIKPKLARSDFTVVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSTSR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02164 407 ProSiteProfiles Myosin motor domain profile. 1 407 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip05g02164 407 SUPERFAMILY ALDH-like 54 170 IPR016161 GO:0016491
Aip05g02164 407 Gene3D - 272 407 - -
Aip05g02164 407 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 56 177 IPR016162 GO:0016491
Aip05g02164 407 PANTHER MYOSIN 189 407 - -
Aip05g02164 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 406 IPR027417 -
Aip05g02164 407 PRINTS Myosin heavy chain signature 255 283 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip05g02164 407 PRINTS Myosin heavy chain signature 308 336 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip05g02164 407 SMART MYSc_2a 64 407 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip05g02164 407 Pfam Myosin head (motor domain) 189 406 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip05g02164 407 Gene3D Myosin VI head, motor domain, U50 subdomain 189 271 - -
Aip05g02164 407 Pfam Aldehyde dehydrogenase family 115 170 IPR015590 GO:0016491
Aip05g02164 407 PANTHER MYOSIN-16 189 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02164 Aip-Chr5 94323507 94327590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02164 189 407 Myosins gene family AT1G54560 85.388 3.01e-131 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02164 K10357 - ahf:112805813 481.485