Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02156 ATGACCCGGCCCCCATCCCGCGCACACAACACAATACTCACACGCACCACCTCACCCACGCGGAAGAGGAGAGCTCGAGGAAGGAGACGCCGCCTTGCTGCCAGCTCCGTCGAAGACCAGCCCGCCACCGCTGTCGAGTCAAACTCGAGAGAGAGTGTGTGCAACGATGAGAGAGGAGGAGCCGCCACCGAGGAGGGGAAAGAGGAGCTGCTCCCTCGCCAGTCACCGTCATGCTTCCTGGTTGCCGATGAGGGAGCCGCGAGATCCGTTGCCATCGCGAGAAGGGGGACACGCGAGAGGGAGCCCTCAGTGAAATCAAAATTTTACAGATTCGACAAGGAAGGGAACCGGTGGAAGGAGAGAACCGATGGTACCGTCAAGTTCCCGAAGAACAAGGTTAGTAGCAGGGGTGCTATAACAAAGAGAATGACTGTAATTAAAGAAATGGCCGGAATGGATGTCCTATGCAGTGATAAAACAGGCACATTAACTCTCAACAAGCTTACAGTGGACAAGAATCTAATTGAGACCAAAAGGAGGTACTATTTCAACTACCAACCTGGTGATCAGCTTGCAATTGCTAAGGAAACAGGAAGGCGTCTTGGAATGGGCTCTAACATGTATCCTTCTTCGTCGCTGCTGGGAGAAAGCAAAGATAATTTTGCTTCTGTTCCCGTCGATGATCTTATAGAGAATGCAGATGGTTTCGCTAGTGCTTTCTTGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGAGTGAATGATGCACCAGCTTTGAAGATAGCAGACATAGGTATCGTTGTAGCAGATGCAACAGATGCTGCAAGAAGTGCCTCTGATATAGTTCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGAAATTTTCCAAAGAGTGAAAAACTACACAATATATGTTGTATCTATCACCATCCGTATTGTGGTTGGCTTTATGTTACTCACATGCATTTGGGAATTTAACTTTCCTCCCTTTATGGTTCTTGTCATAGCCATTCTCAATGATGAATAG 1059 0.4806 MTRPPSRAHNTILTRTTSPTRKRRARGRRRRLAASSVEDQPATAVESNSRESVCNDERGGAATEEGKEELLPRQSPSCFLVADEGAARSVAIARRGTREREPSVKSKFYRFDKEGNRWKERTDGTVKFPKNKVSSRGAITKRMTVIKEMAGMDVLCSDKTGTLTLNKLTVDKNLIETKRRYYFNYQPGDQLAIAKETGRRLGMGSNMYPSSSLLGESKDNFASVPVDDLIENADGFASAFLRLQARKHICGMTGDGVNDAPALKIADIGIVVADATDAARSASDIVLTEPGLSVIISAVLTSREIFQRVKNYTIYVVSITIRIVVGFMLLTCIWEFNFPPFMVLVIAILNDE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02156 352 PRINTS H+-transporting ATPase (proton pump) signature 284 309 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip05g02156 352 PRINTS H+-transporting ATPase (proton pump) signature 253 269 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip05g02156 352 Gene3D - 153 167 IPR023214 -
Aip05g02156 352 Gene3D - 188 290 IPR023214 -
Aip05g02156 352 MobiDBLite consensus disorder prediction 51 71 - -
Aip05g02156 352 PANTHER CALCIUM-TRANSPORTING ATPASE 130 177 - -
Aip05g02156 352 MobiDBLite consensus disorder prediction 1 74 - -
Aip05g02156 352 PANTHER CALCIUM-TRANSPORTING ATPASE 188 351 - -
Aip05g02156 352 MobiDBLite consensus disorder prediction 1 18 - -
Aip05g02156 352 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 243 333 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip05g02156 352 PANTHER PLASMA MEMBRANE ATPASE 188 351 - -
Aip05g02156 352 PANTHER PLASMA MEMBRANE ATPASE 130 177 - -
Aip05g02156 352 Gene3D - 168 177 IPR023299 GO:0000166
Aip05g02156 352 SUPERFAMILY HAD-like 154 335 IPR036412 -
Aip05g02156 352 Gene3D - 291 351 - -
Aip05g02156 352 Gene3D - 132 152 - -
Aip05g02156 352 ProSitePatterns E1-E2 ATPases phosphorylation site. 158 164 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02156 Aip-Chr5 93687034 93692469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02156 188 351 Primary Pumps ATPases AT5G62670 79.769 5.77e-87 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02156 K01535 - aip:107607271 335.109