Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02152 ATGGAAGGAGAGACAATTAAGGCATTGAGATTGTGCAAAGAGGTCGATAGTGGAAGGTCTAGTTGTAAAGTAGATAAAGCTCATCTCCTCGTCGCCGTCGCCGCTGCAAACAATGTCGTTGTTGCTACCTTCAACGAGCTCTGCGATTTGGTTGCACCTTCTCTGTCACTTCCAATAGCAAATCAGATCTACCAAAATATTCGACGGCATCCTCGGTCAGAGATTCGTCGCGAAATGGACATAGCTGTTGTCCCTCTTCAAGTCATTCTTCCAATACTAGAGAGCCAGAATCTGGCTAAGGAAAGCATTTGGCCAATGCTTGCTCAAGAAAGTTTAAAGGCATTAGTCACTTTACTTGAACCCTTATATGCTTGGAACAAATTGGCAAACATATTATTCTGTGATTCTCTTGCTGGTGTCGGGTTTTTGTACTCGAATAAGACGACGGATCTGTACACATTTGGTGACCAGAGAACAGCTGAAGATGCCTATGCATTTCTTGTTAAGTGGTTTGAAAGATTTCTTCAGTATAAGCATAGAGAGTTCTACATTGCTGGAGAAAGCTATGCAGGGCACTATGTTCCTCAGTTGTCTCAAATTATTTATGAGAGAAACAAGGGAATCAAGAATCCAGTGCTAAATTTCAAGGGATTTATGTTGATTGGTGTGGAACCAACTGAAAGTTCAGTGCTGTCAGGTGGAAAACCTGATCTCACATGTTGGATTACTAGCTTGCTCTGCAGCGATGTGTTAGAAAAGATGCTGTAA 768 0.4206 MEGETIKALRLCKEVDSGRSSCKVDKAHLLVAVAAANNVVVATFNELCDLVAPSLSLPIANQIYQNIRRHPRSEIRREMDIAVVPLQVILPILESQNLAKESIWPMLAQESLKALVTLLEPLYAWNKLANILFCDSLAGVGFLYSNKTTDLYTFGDQRTAEDAYAFLVKWFERFLQYKHREFYIAGESYAGHYVPQLSQIIYERNKGIKNPVLNFKGFMLIGVEPTESSVLSGGKPDLTCWITSLLCSDVLEKML 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02152 255 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 117 220 IPR001563 GO:0004185|GO:0006508
Aip05g02152 255 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 117 220 - -
Aip05g02152 255 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Aip05g02152 255 Gene3D alpha/beta hydrolase 104 228 IPR029058 -
Aip05g02152 255 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Aip05g02152 255 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Aip05g02152 255 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Aip05g02152 255 SUPERFAMILY alpha/beta-Hydrolases 117 221 IPR029058 -
Aip05g02152 255 Pfam Serine carboxypeptidase 118 220 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02152 Aip-Chr5 93246150 93253283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02152 80 114 Inorganic Solute Cotransporters AT4G04850 77.143 1.83e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02152 K16297 - aip:107643618 197.978