Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02150 ATGAAGGGGTCACGAGATGCGCATGAGCCCAGCCACATGCTATCGTTTCTTCCTCTCCGTCTCTCTATCTCTGGCCCTTCCTCTGCCCCTAATAACGCCAATAACACCAACAAAGATGCCAAAGCTGTTGATAAAGCAAGCGTGATAAGATCAAAACATTCGGTGACTGAGCAGCGAAGAAGAAGCAAGATAAATGAGAGATTTCAGATATTGAGGGATCTCATACCTCATAGTGATCAAAAGAGGGACACAGCATCATTCTTACTGGAGGTGATTGAGTATGTTCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGCTCATATCAAGGTTGGGGTCATGAACCCTCAAAGTTGATGCCATGGAGAAATAGCCATTGGCGTGTGCAAAGCTTTGTTGGGCAACCTCAAGCCATAAAGAATGGTTCAGGTCCGGTGTCACCTTTTCCTGGAAAGTTTGACGAAAGCAACATTAGTATCTCTCCAACTATGCTTAGCGGCAACCAGAATATGATAGACACCGATCAGGGTAGGGATATTGTCAGCAAAGCATCCGAAGGACAAACTGATTTAGCTAGCAAGGGAATAGCTCTGCCCTTGGGTATGCACCCAAACATGTCTGTTCCTGTCAGAAGCGATGGTGTACTTTCACATCCTCTACAGGGATCTGTTTCAGAAGCGCAGTCAACTGAGTGCCCTGCCGCTAGTGAACCACTGAGCCAACAGGACGAGCTGACTATTGAAGGAGGGACAATCAGCATTTCTAGTGTGTACTCCCAAGGGTTGTTGAACAATCTGACTCAGGCACTACAGAGTGCTGGTTTAGATCTATCACAGGCCAGCATTTCGGTTCAGATTAATCTTGGAAAACGAGCAAACAATGGACCAAGCTGTGGGACCTCTTCTCCCAAGAATCACGACATGGTTCCTTCCAGCAACCAAGCTTTTGCACAGTTTAGAGATGCAGGCAGTGAAGACTCGGACCAAGCTCAGAAACGTCTGAAAACATTCAAGTGA 1017 0.4631 MKGSRDAHEPSHMLSFLPLRLSISGPSSAPNNANNTNKDAKAVDKASVIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGHEPSKLMPWRNSHWRVQSFVGQPQAIKNGSGPVSPFPGKFDESNISISPTMLSGNQNMIDTDQGRDIVSKASEGQTDLASKGIALPLGMHPNMSVPVRSDGVLSHPLQGSVSEAQSTECPAASEPLSQQDELTIEGGTISISSVYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRANNGPSCGTSSPKNHDMVPSSNQAFAQFRDAGSEDSDQAQKRLKTFK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02150 338 MobiDBLite consensus disorder prediction 43 61 - -
Aip05g02150 338 PANTHER TRANSCRIPTION FACTOR BIM2 25 336 - -
Aip05g02150 338 MobiDBLite consensus disorder prediction 25 61 - -
Aip05g02150 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 98 IPR011598 GO:0046983
Aip05g02150 338 CDD bHLH_AtBIM_like 47 123 - -
Aip05g02150 338 MobiDBLite consensus disorder prediction 218 239 - -
Aip05g02150 338 MobiDBLite consensus disorder prediction 209 239 - -
Aip05g02150 338 MobiDBLite consensus disorder prediction 291 315 - -
Aip05g02150 338 SMART finulus 54 104 IPR011598 GO:0046983
Aip05g02150 338 MobiDBLite consensus disorder prediction 25 41 - -
Aip05g02150 338 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 25 336 IPR044295 GO:0003700|GO:0006351|GO:0046983
Aip05g02150 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 49 119 IPR036638 GO:0046983
Aip05g02150 338 Gene3D - 44 117 IPR036638 GO:0046983
Aip05g02150 338 Pfam Helix-loop-helix DNA-binding domain 50 99 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02150 Aip-Chr5 91967011 91973613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02150 25 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 58.363 1.80e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip05g02150 HLH 1.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02150 - - gmx:100816055 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02150 05 91967011 91973613 Aip05g02150 05 91967011 91973613 ECH