Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02145 ATGGATTTGCTTGGGCCTAGTCTTGAGGATCCATTTGTGTATTGTGGAAGGAAGTTCTCATTGAAGACAGTATTGATGTTGGCTGATCAAATGATGACTAGAATAGAATATGTGCATTCCAAAGGTTTTCTACATAGAGATATAAAGCCTGACAACTTCCTCATGGGACTTGGTCGGAAAGCAAACCAGTCCCAATCAGAGAGCAGATTTGGTGCTAGCCTGCAGGATGCGAGGAAGAAAGGAGTCTGTGACAGTGCTGTTGTGTGGCACTTGTGGCTGTGGCAAATCCACATTGTCTTCACTGCTGATAATGGAATTGGAAGTCCAATGTATGGTCCCTTGCGGATTGGTAAGGCAGAACCGATAAATCTTCAGTTTGGTTTTTATGGGATCATTGCTTGGCCCAGTGATGGTGGTACTAGTCGAGCTGGAAATGTTGATGAGTCGAGGGCTGATGATTCTGGTAGTAGATATTTATCCTCTTGCTGTAGCTCACCGACCTCAGAAGGTCCTGCGAAAGAGCTCAAGGAAGATTTCTCAGTGCATGATAGTGATGAAGAGTTAGACGACGATGATCAGCTAGAGGTAGGTAGTAATGATGATTTAAGTGATGATGGTCACAAAGACGTCCATGACGAGAAAGGGTCAGTTGATGAGGAATCTACAAAGTACCTTTTCCTCCTGATCTTGATAAGAAGGCAAGTGTTTTTTCTTGCTAGTTTTTCTTATAGGCTTTGGCATTTGCCTCCTCATGAGTTTGCTCATATTCCCAATTGGTCAGGGGAAGATCTCCATAATTCAACAGTTTATAAGCTTGAAGGCCTAGAAAATTCACTAGAAGCTTGTGTGAATGAATACTTTCATGGAGAAATTGAAGCCTCTGGAGAGGACAAATCGTCTGAGGATCCAATATACAAAGGCTATAAAGCTGTTTTGGATTCAAAATCCTCTGATGAAATGTTGGCAAGTCCATTTAATCATTCCTTGGTTCATTATTCCAATGAAAGCTGTTCTTCGCCAATTCGGATACACTGTGGTTGCTTTAATGGCTATTTGAGAACAGAAATTCAGGAGGCAAAAATTGGGCATGAAAATAAGCACTCTAGAAGCAAATAA 1116 0.4167 MDLLGPSLEDPFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANQSQSESRFGASLQDARKKGVCDSAVVWHLWLWQIHIVFTADNGIGSPMYGPLRIGKAEPINLQFGFYGIIAWPSDGGTSRAGNVDESRADDSGSRYLSSCCSSPTSEGPAKELKEDFSVHDSDEELDDDDQLEVGSNDDLSDDGHKDVHDEKGSVDEESTKYLFLLILIRRQVFFLASFSYRLWHLPPHEFAHIPNWSGEDLHNSTVYKLEGLENSLEACVNEYFHGEIEASGEDKSSEDPIYKGYKAVLDSKSSDEMLASPFNHSLVHYSNESCSSPIRIHCGCFNGYLRTEIQEAKIGHENKHSRSK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02145 371 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 99 223 - -
Aip05g02145 371 MobiDBLite consensus disorder prediction 200 215 - -
Aip05g02145 371 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
Aip05g02145 371 Pfam Aluminium activated malate transporter 256 323 IPR020966 GO:0015743
Aip05g02145 371 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 99 223 - -
Aip05g02145 371 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02145 371 MobiDBLite consensus disorder prediction 183 199 - -
Aip05g02145 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Aip05g02145 371 MobiDBLite consensus disorder prediction 139 215 - -
Aip05g02145 371 SUPERFAMILY Protein kinase-like (PK-like) 1 58 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02145 Aip-Chr5 91412921 91416291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02145 257 322 Miscellaneous Gene Families AT4G17970 59.091 5.00e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aip05g02145 ALMT 1e-16 CL0307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02145 - - ahf:112748641 392.889