Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02136 atggagctacgcgaagccgtcgtcgccgttgtcaccatcgatgcTTCTCCTTGTCATTTGTGGGTTGTCAACTCTTCTGCTTCTGCTGCCATGCCGTTGTTTGCCCCTCCGGACGTTGCTGCTTTTGAATCGTGTCCTATTACTCGAATATGCTGCAAGAAGCTATCAGAAAGTGGCATTGATGAGAAGAAGCACAAACCCTCCACCAGCAATACCACTGCCTCTAAATCCAAGGATAGAATGGAAGATTACAATTTTGCTATGAAGAGGATGATGAGGAATCCTTATGAGTATCACCACGATCTGGGTATGAATTACACACTTATAATTGACAATCTCATTGTGGGATCCCAACCACAGAAACCTGAAGACATCGATCACCTCAAGAAGGAAGAGGGTGTGACATACATTCTGAATTGCAGCAAGATAATGATGTAG 438 0.3881 MELREAVVAVVTIDASPCHLWVVNSSASAAMPLFAPPDVAAFESCPITRICCKKLSESGIDEKKHKPSTSNTTASKSKDRMEDYNFAMKRMMRNPYEYHHDLGMNYTLIIDNLIVGSQPQKPEDIDHLKKEEGVTYILNCSKIMM 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02136 145 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 51 141 - -
Aip05g02136 145 Gene3D Protein tyrosine phosphatase superfamily 88 143 IPR029021 -
Aip05g02136 145 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 51 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02136 Aip-Chr5 89694576 89695220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02136 67 142 Protein tyrosine phosphatase (PTP) family AT3G10940 72.368 3.29e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02136 - - aip:110272055 299.286