Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02133 atggagCTTGGCCACAAGTCTGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCAATCATCGCCTCCACCGAAACTGGAACCACTCTCTCCTCCGTTTCTGTCTCCGTACGCGACGGTGCTGGCCCTCTCTCTTCTCCTTCCTCAACCTCCGCAGCATCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGCGCATACGCACTGATGATGACGCTTCTGCCAAGGACGACGACGTCTCCGTGGGGCCTGCCGTGGGTCCTTAG 294 0.602 MELGHKSDGQTIEWLLRQAEPSIIASTETGTTLSSVSVSVRDGAGPLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDDVSVGPAVGP 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02133 97 MobiDBLite consensus disorder prediction 28 59 - -
Aip05g02133 97 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 96 IPR005333 GO:0003700
Aip05g02133 97 MobiDBLite consensus disorder prediction 28 61 - -
Aip05g02133 97 ProSiteProfiles TCP domain profile. 1 26 IPR017887 -
Aip05g02133 97 Pfam TCP family transcription factor 2 53 IPR017887 -
Aip05g02133 97 MobiDBLite consensus disorder prediction 75 97 - -
Aip05g02133 97 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 2 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02133 Aip-Chr5 89584642 89584935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02133 2 92 TCP Transcription Factor Family AT5G23280 57.732 4.00e-26 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip05g02133 TCP 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02133 K16221 - aip:107646651 139.043