Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02128 ATGACAAATAAATCTAGATCAACCTTTCCACCACATTTCTGCCTCTGGAAGATCTGTATATTATATATTTCACCCTCTTCTTCCCTCTTCTGTTCCAACTTCCTCACCTATTTATGCTGGTACCAGGCATACCATCAACATGTTGTGGATATCTCTGACAGCAAAAATGACCCTTTAGAAAGCAACTCCTTCTCAGGATGTAAAGATCTGGCTGCTCGGCTCTCTAGAACATTTGTTGGTGCTGCTAGGGTCAAGCACAAGTTAGACATTTTAAAAGTTATCAGGGATGGCATTGAATATGCTTTTGTTGAAGCTCCGAAACACTTGTCATTTCTCTGCGACGACAGCTCCAAGTATTTTGTCACTGATGCCGATGACGGTAGCTTGTTGGGACCAACCTTGGCTTTGCTTCTCGACAATGTCTTCTACCAAAGCTGGAAAGAAGTGAAAGGAGCAATTATGGAAGGTGGAATTCCATTCAACAAGGTTTATGGCATGCATGCCTTTGAGTATCCAGGCGTAGATCAAAGGTTCAATGAGGTGTTCAACAAAGCTATGAATTTCCTCTTAACTTCAAAAAGTGAAGATGCTGATATGAAGCTTATCGATTTTAGTTTATCAGATTTCATCCGGACAGGTGACAATTATAGTGATTCTCAATTCTTTTTCTTCGTTTTACTTGCAAAGCAATCTCTTATTCCATTATTATATTAG 714 0.3964 MTNKSRSTFPPHFCLWKICILYISPSSSLFCSNFLTYLCWYQAYHQHVVDISDSKNDPLESNSFSGCKDLAARLSRTFVGAARVKHKLDILKVIRDGIEYAFVEAPKHLSFLCDDSSKYFVTDADDGSLLGPTLALLLDNVFYQSWKEVKGAIMEGGIPFNKVYGMHAFEYPGVDQRFNEVFNKAMNFLLTSKSEDADMKLIDFSLSDFIRTGDNYSDSQFFFFVLLAKQSLIPLLY 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02128 237 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 106 190 - -
Aip05g02128 237 Gene3D Vaccinia Virus protein VP39 122 205 IPR029063 -
Aip05g02128 237 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 188 IPR029063 -
Aip05g02128 237 PANTHER O-METHYLTRANSFERASE 106 190 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02128 Aip-Chr5 88107309 88108671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02128 92 187 Monolignol Biosynthesis Gene Families AT5G54160 40.625 5.16e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02128 - - aip:107641939 247.284