Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02125 ATGCTTAGCATGAGAAGGCTTATGGTGCAGCATAAACTTGTCTCCATTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGTTGCATTTGTGAATCAGTATGGATCTGAAAGTAATGGTGCCATGAGTTGCATCTTTGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGCAATTCTCAACCAAGAATTTCATTGGCAGGGGTGGATTTGGGCTTGTTTTCAAAGGGATTTTGTCCGATGGTTCAGTCGTGGCGGTTAAGAGGATCTTAGAATCTGATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGAAGATTATTAGCAACCTGAAGCAACGGAATCTGGTGCCTCTTCAAGGCTGTTGTGTAGTGGATGATGATGATGAAAAATTTAATGACAGGGGAAGCCAAAGGTTTTTGGTTTATGATTACATGCTGAATGGAAACCTTGAAGACCATCTGTTTCTGGTGAGTGAGCAGCAAAAGTTGAAAAAATCGCTGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATGTGGCAAAGGGGCTGGCTTATCTGTCGTGCGATGCATGTGTTCACGGTGATATCTCAGCAGCATTACCTTCTTCCCCTGCCTCCATCTGCTGCTTCTCCTCTCCAACAACAGTGTCCCCACCTCCAACCACTCCAAGGTTCCTTGCATCTCCGCCGGTGCTAACCACTAGTTTGCCGTTGTTCGTCCAACACGCTGACCCTCACAACCCGCTGTTCTTCGATGGTGCGTTTGACTTCGCATTCTCCGCAAGGCTTGATGAGAAGTTGTTCCAGTGA 831 0.4477 MLSMRRLMVQHKLVSIDGNASHSENCFKFTILYAVAFVNQYGSESNGAMSCIFGRLGGRSLMMMQFSTKNFIGRGGFGLVFKGILSDGSVVAVKRILESDFQGDVEFCNEVKIISNLKQRNLVPLQGCCVVDDDDEKFNDRGSQRFLVYDYMLNGNLEDHLFLVSEQQKLKKSLTWPQRKSIILDVAKGLAYLSCDACVHGDISAALPSSPASICCFSSPTTVSPPPTTPRFLASPPVLTTSLPLFVQHADPHNPLFFDGAFDFAFSARLDEKLFQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02125 276 Gene3D Transferase(Phosphotransferase) domain 1 152 207 - -
Aip05g02125 276 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 55 - -
Aip05g02125 276 ProSiteProfiles Protein kinase domain profile. 66 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02125 276 Gene3D Phosphorylase Kinase; domain 1 60 151 - -
Aip05g02125 276 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 65 203 - -
Aip05g02125 276 Pfam Protein tyrosine and serine/threonine kinase 69 205 IPR001245 GO:0004672|GO:0006468
Aip05g02125 276 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 65 203 - -
Aip05g02125 276 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 55 - -
Aip05g02125 276 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Aip05g02125 276 SUPERFAMILY Protein kinase-like (PK-like) 65 205 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02125 Aip-Chr5 87502268 87507428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02125 9 53 Receptor kinase-like Gene Family AT1G11050 46.667 8.65e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip05g02125 PK_Tyr_Ser-Thr 3.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02125 - - aip:107640759 343.969