Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02122 ATGAATTTCTGTTCTCACTACATGGATGATGAATATGAGAAACTGTTCCGAAGACTCAACCCTCCCAGAGTTGTAATTGATAATGAATCCGGCAAGAGCGCCACTGTTATAAGGGTTGATAGTGCAAACAAGCATGGAATTCTTCTTGAAGTTGTACAAATCCTCACTGATCTGAACCTCATCATAACCAAAGCTTACATTTCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTCACTGACCAAGATGGAAACAAAGTTACGGATGAAGCTATTTTGGAATACATTGAAAAGTCTCTTGGTCCCGAATCATGTGTTTCATCTCCCATGAGGTCCGTTGGGGTGAAGCAAACAGTGGACCACACCACAATAGAGCTTATGGGGAGTGATAGGCCGGGGCTGCTCTCCGAAGTGAGCGCCGTCCTCACCAACCTAAAGTGCAACATTGTGAGTACAGAGGTGTGGACTCACAACACCCGTGCGGCCGCTGTGATGCATGTAACCGATGATGAGACAGGCTCTTCAATCACCGATCTGAAGAAGCTGTCTCTGATCAAGGAGCTTCTTTGCAATGTGCTTGGTGGTGGAAACAGAAAAAGGGTTGCCAAGACTATTGTTACTGATGAAGTCACAACGCATACCGACAGGAGGCTTCACCAGATGATGTTTGATGACAGGGATTATGAGCGAGTTAGTGACGACGAATTTGACGAGAAGCAGAGGCCAAATGTGAATGTTGTGAATTGGTCTGATAAAGATTATTCGGTTGTTACCATTCAGTGTAAGGATAGGCCGAAGCTTCTATTCGACACAGTTTGCACTTTGACAGATATGCAGTACGTGGTTTTTCATGCGAACGTCAATGCCGAGGGGCCAGAAGCATATCAGGAATATTACATAAGGCATATAGATGGGTCACCTGTAAAATCAGATGCAGAAAGACAAAGGGTGATACAATGTCTTGAAGCTGCAATTGAAAGAAGAGTATCTGAGGGTTTGAAGTTAGAACTCTGCACAACTGATAGAATCGGACTTCTTTCTGATGTCACGCGTATCTTTCGAGAGAACAGCCTCACTGTTACAAGGGCAGAAGTGACCACGAAAGGAGGCAAAGCTGTTAACACGTTCTATGTGCGTGGCGCCTCCGGTTGCACAGTTGATTCTAAGACCATAGAATCAATTCGGCAAGCAATAGGGAACACTATCCTTAAAGTTAAGGGCGCCCCTGAAGAATCTGTTCCTCAGGATTCCCCTACAAGATCTCTCTTTGGTGGTCTTTTCAAGTCCAGATCCTTTGTTAATTTCGGATTGGTCAAGTCTTATTCCTGA 1332 0.4444 MNFCSHYMDDEYEKLFRRLNPPRVVIDNESGKSATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEAILEYIEKSLGPESCVSSPMRSVGVKQTVDHTTIELMGSDRPGLLSEVSAVLTNLKCNIVSTEVWTHNTRAAAVMHVTDDETGSSITDLKKLSLIKELLCNVLGGGNRKRVAKTIVTDEVTTHTDRRLHQMMFDDRDYERVSDDEFDEKQRPNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANVNAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLELCTTDRIGLLSDVTRIFRENSLTVTRAEVTTKGGKAVNTFYVRGASGCTVDSKTIESIRQAIGNTILKVKGAPEESVPQDSPTRSLFGGLFKSRSFVNFGLVKSYS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02122 443 SUPERFAMILY ACT-like 121 182 IPR045865 -
Aip05g02122 443 SUPERFAMILY ACT-like 331 401 IPR045865 -
Aip05g02122 443 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 441 IPR040217 -
Aip05g02122 443 Pfam ACT domain 35 94 IPR002912 -
Aip05g02122 443 Pfam ACT domain 124 173 IPR002912 -
Aip05g02122 443 ProSiteProfiles ACT domain profile. 36 115 IPR002912 -
Aip05g02122 443 ProSiteProfiles ACT domain profile. 124 207 IPR002912 -
Aip05g02122 443 Gene3D - 120 192 - -
Aip05g02122 443 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 4 441 - -
Aip05g02122 443 CDD ACT_ACR_1 34 104 - -
Aip05g02122 443 SUPERFAMILY ACT-like 33 99 IPR045865 -
Aip05g02122 443 CDD ACT_ACR_3 255 329 - -
Aip05g02122 443 Gene3D - 334 409 - -
Aip05g02122 443 ProSiteProfiles ACT domain profile. 335 414 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02122 Aip-Chr5 86919659 86922828 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02122 - - aip:107643722 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02122 05 86919659 86922828 Aip05g02122 05 86919659 86922828 ECH