Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02114 atgagtcttatcgaagagagcacaaggggggttgatggtgatgatggtgactatctaatagagttcccggagggtgatgacgaagatgaggatgatgaTGAGGATGCTAGTCTTGATGATGACGATGACGATTGTGGTGATGACCCTAGGTCTAGCGTTAGAGAGGATGCGATGAGCAGCAAAACCGTTCCTATAGAGGAAATAGAAGCGGTGGATTTGTCAAAAGTAAATGCAGACATAGAAGTAGAAGAATCAATGATGATTGTTGATGAGATTGGGTCATTTGATGCAATTGAACTTTCAGCCCTGACAGCGAAGGACATCCTGAAGACAGAGTTCATAAATTTACAGGAAACTTATGACTACTACAATGAATACGGTCGCATTAAAGGATTTTCAGTGAGGAGGTCGAAGGTGGGTTGCAGAACAAAACAGGGGTCGGAGGGTGAAAGCATTTGGCAAATATTCGTGTGCTCGAAGGAAGGAGAGCTAGAGGGAAAACACATGCAGCCAGAAGACAGGAAGATGGATCCTCGACCTATCATACAGTACAGGTGTGAAGCTCGGATAAAGGTGCATGTTGATGACACTAATGGGCAATGGTATGTTGAACAATTTTTTGATAACCATAATCATGCCATGCTGGATGTGAGGTTTAGGGGTTTGATTCGGTCACACAGATCAGTCAAGGAAGAAAACAAAAGGCAGGCTAGGACGACAAATGCTGAGGAAGCATTGAAAATCTTGTCAGGTTTAAAGAGTACTGATTGTGGAATATTCTGGAAGTACTCGTTGGATGGTGACAAGAGGCTTCAAAATCTCTTCTGGTGCAAAGATGTGGACCATTATATGAAGACGGTGGTGTTTAGTTACGCGATTTTGAGCAACGAGAGTGAAGAAAGCTATGTATGGTTGTTGCGCTCATTTCTTGAGGCAATGAAAGGAAAACAGCCAAAATCCATGATGACAGACCAGAATCTTGCAATGAAGAGTACGGTTAGTACAATTTTTCCCAGTGCACATCACAGGTTGTGTAGCTGGCATTTGTTAAGGAATGGCACTGCTAATGTTGGACGGCATGGGTTTCTTCAGAATTTCCATTTATGCTTGATGGGCGGTGATCTAGAGTCTAATACACACATCCGGGGCAAATACTTCGCAGGACTGAAGATAACATCGAGGTGCGAGGCGTTGAATATGCGGATAAGGAAATTTATACATAATAGGTATAATCTGAGAGAGTTTGTGGAGCACTTCCACCACTATCTTGAGTTCATGAGAAGAAGAGAATTAGTGGCAGATTATAAGTCTGCATATGGCTATCCTGTAGTAAAAATAAAACTCGAAGCAATTGAGCAGTTTGCAGCGACGGTCTATACAAAAGAGGTTTTCGAACTGTTTCAGAGTTGTTTCCACCAAGAGGACGAGCACTTGTGTTTTTTACGAGGTCGTAACGTACTTCAAGTAGATATCATGGGTCGTGGCATCAACTAA 1494 0.3963 MSLIEESTRGVDGDDGDYLIEFPEGDDEDEDDDEDASLDDDDDDCGDDPRSSVREDAMSSKTVPIEEIEAVDLSKVNADIEVEESMMIVDEIGSFDAIELSALTAKDILKTEFINLQETYDYYNEYGRIKGFSVRRSKVGCRTKQGSEGESIWQIFVCSKEGELEGKHMQPEDRKMDPRPIIQYRCEARIKVHVDDTNGQWYVEQFFDNHNHAMLDVRFRGLIRSHRSVKEENKRQARTTNAEEALKILSGLKSTDCGIFWKYSLDGDKRLQNLFWCKDVDHYMKTVVFSYAILSNESEESYVWLLRSFLEAMKGKQPKSMMTDQNLAMKSTVSTIFPSAHHRLCSWHLLRNGTANVGRHGFLQNFHLCLMGGDLESNTHIRGKYFAGLKITSRCEALNMRIRKFIHNRYNLREFVEHFHHYLEFMRRRELVADYKSAYGYPVVKIKLEAIEQFAATVYTKEVFELFQSCFHQEDEHLCFLRGRNVLQVDIMGRGIN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02114 497 Pfam FAR1 DNA-binding domain 121 215 IPR004330 -
Aip05g02114 497 PANTHER OS02G0262500 PROTEIN 106 235 - -
Aip05g02114 497 MobiDBLite consensus disorder prediction 17 46 - -
Aip05g02114 497 Pfam MULE transposase domain 279 352 IPR018289 -
Aip05g02114 497 PANTHER OS02G0262500 PROTEIN 381 480 - -
Aip05g02114 497 PANTHER OS02G0262500 PROTEIN 280 367 - -
Aip05g02114 497 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 381 480 IPR031052 GO:0006355
Aip05g02114 497 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 280 367 IPR031052 GO:0006355
Aip05g02114 497 MobiDBLite consensus disorder prediction 1 60 - -
Aip05g02114 497 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 106 235 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02114 Aip-Chr5 86460458 86464568 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02114 FAR1 2.1e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02114 - - aip:107640707 725.317