Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02112 ATGGGAAGCAACCAAGATGCCAACATGGAGTACAATTTAACATGGTCGTTTCCTGTTGATTCTGGATTCAAATACCTTGTTAGGCTTCATTTCTGCGAGATCTCCATGGAGGTAACTAAGGTCAACCAAAGGGTGTTCAACGTGTATATCAACAACCAAACAGCAGAGGAGAGAATGGATTTGGTTGCTTTGGTTGGTGCACCATTTGTTGCCTTCTACAAAGACTATGTTGTTATGGTTCCTAGGGAAAGCGAGAGGAGGAGAAATATGTCGATTGCGCTTCACCCAAACATAGCATCAAAACCCAAGTTTGCTGATGCCATCTTGAATGGCATAGAGATCATCAAGTTAAGTGACAGTAATTTTAATCTTGCAGTTAGTTTCCCATTGAAAGAGGAACACCAAAAGAAGAAGAAGAAAGCTCCACTTGTGATTGTTCTTGCTTGTACTTCAGCCGTTACTTTTGCGTTGTTTATTGCTATTTATGTTCTTATCCATCAATCTTGTAAGAAACAAAACAGGGAAAATCTTCAAGTACTCTCTTTGAATGCTACTAGAGAAAATTACAAAAATATGCAAGTAAAAATGACCTCAGGTCATCAGTGCTACCAATTCACATTAGCAGAGATTATCATAGCCACTGACAACTTCAAGGAAGATCAAGTGATTGGGGAGGGAGGCTTTGGAAAGGTGTACAAAGGCATAATAAATGATGGAGTCACTCCTTGCGCTATAAAGCGATGCAAAAAAGGTTCGCATCAAGGATTTAAGGAGTTTCAAAATGAGATAAGCCTTTTCACATTTTGTCACTTGAATGTGGTGTCACTCGTAGGCTTCTGCCAAGAGGAGAATGAATTGATACTTGTGTATGAATACATGGCTAATGGCAGTCTTTGTGATCATTTATACAAGAAACAGAACCAGCCACTTTCATGGAATCAGAGACTGAAGATTTGTGTTGGCGCGGCACGAGGACTACATTATTTGCATACTGGCACAAGGCAGCCAATCATTCATCGCGATATCAAGTCAGCCAACATATTGCTGGATGATCACTTGGTGCCTAAGATTTCTGATTTCGGGTTATCAAGAATCATTCCCTTCTCCTCCCACACCCATGTTACCACTGAGGTGAAGGGTACTTTTGGATACTTAGATCCAGAGTACTACAAGAGGAGAAAATTGACTGAAAAATCTGACGTCTATTCGTTCGGCGTGGTTTTGTTTGAAGTGTTGTGTGGAAGACCAGCAGTGAAACGTGTCGAAGTAGAAGAGCAAAGTGAGAAGGTTGGTTTGGCGGAATGGGCCTTGCATTGCCACCAATGTAGAAGCATTGAACATCTAGTTGATGCGAAATTAGAAGGAAAGATCAGATCAGAATGCTTGGTGGCATTTGTAGAAATTGGCATCCAATGTTTGAGTCATAGGAGTGTAGAAAGGCCAACAATGGGAGATGTTCTTAGTAAATTGGAGGATATCTTGTCTTTGCAGGAGAGTTCTGAGGATCAAGAAATAACCATGTGA 1524 0.4081 MGSNQDANMEYNLTWSFPVDSGFKYLVRLHFCEISMEVTKVNQRVFNVYINNQTAEERMDLVALVGAPFVAFYKDYVVMVPRESERRRNMSIALHPNIASKPKFADAILNGIEIIKLSDSNFNLAVSFPLKEEHQKKKKKAPLVIVLACTSAVTFALFIAIYVLIHQSCKKQNRENLQVLSLNATRENYKNMQVKMTSGHQCYQFTLAEIIIATDNFKEDQVIGEGGFGKVYKGIINDGVTPCAIKRCKKGSHQGFKEFQNEISLFTFCHLNVVSLVGFCQEENELILVYEYMANGSLCDHLYKKQNQPLSWNQRLKICVGAARGLHYLHTGTRQPIIHRDIKSANILLDDHLVPKISDFGLSRIIPFSSHTHVTTEVKGTFGYLDPEYYKRRKLTEKSDVYSFGVVLFEVLCGRPAVKRVEVEEQSEKVGLAEWALHCHQCRSIEHLVDAKLEGKIRSECLVAFVEIGIQCLSHRSVERPTMGDVLSKLEDILSLQESSEDQEITM 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02112 507 ProSitePatterns Protein kinases ATP-binding region signature. 223 246 IPR017441 GO:0005524
Aip05g02112 507 Gene3D Phosphorylase Kinase; domain 1 178 292 - -
Aip05g02112 507 Pfam Malectin-like domain 5 116 IPR024788 -
Aip05g02112 507 Coils Coil 493 507 - -
Aip05g02112 507 CDD STKc_IRAK 223 493 - -
Aip05g02112 507 Gene3D - 4 118 - -
Aip05g02112 507 PANTHER OS07G0166700 PROTEIN 6 503 IPR045272 GO:0004714|GO:0006468
Aip05g02112 507 SUPERFAMILY Protein kinase-like (PK-like) 189 490 IPR011009 -
Aip05g02112 507 ProSiteProfiles Protein kinase domain profile. 217 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02112 507 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 503 - -
Aip05g02112 507 Gene3D Transferase(Phosphotransferase) domain 1 293 506 - -
Aip05g02112 507 Pfam Protein tyrosine and serine/threonine kinase 219 490 IPR001245 GO:0004672|GO:0006468
Aip05g02112 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Aip05g02112 507 SMART serkin_6 217 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02112 Aip-Chr5 86134425 86135948 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02112 1 503 Receptor kinase-like Gene Family AT3G51550 47.467 3.82e-166 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip05g02112 PK_Tyr_Ser-Thr 5.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02112 - - gmx:100776324 674.855