Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02110 ATGAGCATGCCGATTTCGTACGCAAATGGTGTTCCTCCTTATGCTGCCCCAAAAGATGTCTACCGCACTTCCCGTTCAATGGAAACCTTTAAGGCAGGCTTGATCAACTTAAACTTCAACATGACGTGGTTTTTCCCTGTTGATTCTGGATTCAAGTATCTTGTAAGGCTTCACTTCTGTGAAATTTATAGCCAAATCACGAAGGTGAATGAAGTTGTGTTTTCTATATACTTAAATAATCAAACAGCTGATGCAGGTTTTGATCCAATAAGCGTGAGTGGGGGCCCCGGAGTTGGTGTATACCAAGATTATGTGGTGATGGTTTCCAGAGCTAGCGAGGCAAAGCAGGATTTGTGGCTAGATCTCCACCCAAACAAGTATTCCAAACCTCTGTACTACAATTCATACTTGAATGGTGTAGAGATCTTTAAACTAAGCAGTACCGATGAGAAGAATCTTTCTGCGCTTAATCCTTCCCCTCTCGATAGCAATTTACGCTCAGGTGTAAAAGCTTCCCATGCTATTGTTAAAAACTCAAAGAAACTCACGTTCATCCTCATCGTATGTGGAACTGCTGCAGTGGTTATACTAGTTCTCCTGTGTCTAATTCTGTGCAAGATCATTATGCCAAGGAGGATCATATCATGGTTTGATCGCTTTTCCATCAAAACTAACGATGTCAAAGAAGTAAACAAGATACCGTTTGGCGCTCATATTTCATTGCAAGAGATAAAGGCAGCAACAGGCAACTTCGACGAGGCTCTAATCATCGGCATAGGCGGATTTGGAAAGGTTTACAAGGGTAGTTTTGATGGTGGGGATACTTATGTAGCCGTAAAGCGTGGTGATTCATTGTCAGAACAAGGTGCTCTAGAATACAAGACTGAGATCGAATTTCTCTCGAAGCTGCGGCATCACAACCTTGTGTCTCTTTTGGGCTACTGCAATGAAGATGAGGAGATCATACTTGTATATAACTTCATGGCCAGTGGAACGCTCCATGATCATCTCCATTTGAGACAGAGAGATCATACCCCCTTATCGTGGATTCAACGTCTCGATATATGCATTGGAGTTGCAAAAGGTTTGCACTATCTGCACACAGGGACACAGCAGAGGATCATACACCGCGACATCAAGACAACCAACATACTCTTAGACCATAATTGGGTGGCAAAAATTTCTGATTTTGGGTTGTCAAAGTCAAGTTACCCATCCTTTAGCACCACCAATGTGAAGGGAACTGCTGGTTATCTTGATCCAGAGTATTATAAATTCCACAAGTTGACCGAGAAGTCGGATTTATACTCACTCGGGGTTGTGCTGCTGGAAGTTCTAAGCGCAAGGCCTGCTGTGAGTCAAGGTGACGTGGACAACAACAATGACGAGCCTCTGATGTTGGCTGAATTTGCTAAGTTATGCTTTGAGAATGGCAATTTGGAGCAGATAGTAGATCCCAAAATAGAAGGAGAGATAGTAAAAGAGTGCTTTGAGGTATATTTAGGAGTTGCAATGAAGTGTTTGGCTGAAAGAGGTGTGGAGAGGCCATCTACCGGTGATGTTCTGCAGAATCTTGAACTCGCAAAGCGATTGCAGAGAAATGGTGGTGTTACTCGTGATGGAAATACGCAAAGGAATAGTAATCATGCTCTACAGGGCAATTCAGATTTGACTCCTGGGATTGAGTTTTCTGATCTCATAATGCCTGCTGGTAGATGA 1719 0.4293 MSMPISYANGVPPYAAPKDVYRTSRSMETFKAGLINLNFNMTWFFPVDSGFKYLVRLHFCEIYSQITKVNEVVFSIYLNNQTADAGFDPISVSGGPGVGVYQDYVVMVSRASEAKQDLWLDLHPNKYSKPLYYNSYLNGVEIFKLSSTDEKNLSALNPSPLDSNLRSGVKASHAIVKNSKKLTFILIVCGTAAVVILVLLCLILCKIIMPRRIISWFDRFSIKTNDVKEVNKIPFGAHISLQEIKAATGNFDEALIIGIGGFGKVYKGSFDGGDTYVAVKRGDSLSEQGALEYKTEIEFLSKLRHHNLVSLLGYCNEDEEIILVYNFMASGTLHDHLHLRQRDHTPLSWIQRLDICIGVAKGLHYLHTGTQQRIIHRDIKTTNILLDHNWVAKISDFGLSKSSYPSFSTTNVKGTAGYLDPEYYKFHKLTEKSDLYSLGVVLLEVLSARPAVSQGDVDNNNDEPLMLAEFAKLCFENGNLEQIVDPKIEGEIVKECFEVYLGVAMKCLAERGVERPSTGDVLQNLELAKRLQRNGGVTRDGNTQRNSNHALQGNSDLTPGIEFSDLIMPAGR 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02110 572 ProSitePatterns Protein kinases ATP-binding region signature. 257 280 IPR017441 GO:0005524
Aip05g02110 572 Pfam Malectin-like domain 12 144 IPR024788 -
Aip05g02110 572 Pfam Protein kinase domain 256 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02110 572 PANTHER FERONIA RECEPTOR-LIKE KINASE 4 572 - -
Aip05g02110 572 MobiDBLite consensus disorder prediction 536 557 - -
Aip05g02110 572 PANTHER OS07G0166700 PROTEIN 4 572 IPR045272 GO:0004714|GO:0006468
Aip05g02110 572 CDD STKc_IRAK 257 526 - -
Aip05g02110 572 SMART serkin_6 251 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02110 572 Gene3D - 2 146 - -
Aip05g02110 572 MobiDBLite consensus disorder prediction 533 557 - -
Aip05g02110 572 SUPERFAMILY Protein kinase-like (PK-like) 230 527 IPR011009 -
Aip05g02110 572 Gene3D Transferase(Phosphotransferase) domain 1 328 538 - -
Aip05g02110 572 ProSiteProfiles Protein kinase domain profile. 251 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02110 572 Gene3D Phosphorylase Kinase; domain 1 218 327 - -
Aip05g02110 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02110 Aip-Chr5 86130767 86132485 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02110 2 535 Receptor kinase-like Gene Family AT3G51550 49.286 9.31e-174 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip05g02110 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02110 - - gmx:100776859 747.658