Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02103 ATGGCTCTCATTCATAGAACAGAAGACAACTTAGAGGTATCTATTAAGACTCGCAAAGAAGCCAAACGAATGGCCTTGTCGGATGCTATTGCCTCTGCAAAGGCTAGAGTGGAAAGCCTTAAGGCAAGCATTCAGCAGCAGCAGACAAAGAAACAAGACTTTGCGGAATTTCCTGCTCAACAGTCCTTTGGGCTGTTTGATGAGAAAGGAAAGCTTCTTGGTTCTTCTAGCAGCCCAATTCAGAGATGGAAAGATGGTGCTTTTGTTGAGATTCATCTTTTTGTGCTAAACAGCAATCCTCCACAGATATATGGCTTGAAATCTGTGCAGCTGTGTGATCTTGCTGGTTTGGAAGATGCATTAGTGAAGCGTGTGATGATCACCCCAGAGGAAGTTATTAAACGGAGCCTCGATCCGCAAAGCACAGCAATAAGCAGAGATGGCTTTGCCAAAACAATATATTCTAGACTCTTTGACTTGTAA 483 0.4327 MALIHRTEDNLEVSIKTRKEAKRMALSDAIASAKARVESLKASIQQQQTKKQDFAEFPAQQSFGLFDEKGKLLGSSSSPIQRWKDGAFVEIHLFVLNSNPPQIYGLKSVQLCDLAGLEDALVKRVMITPEEVIKRSLDPQSTAISRDGFAKTIYSRLFDL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02103 160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 159 IPR027417 -
Aip05g02103 160 Coils Coil 30 50 - -
Aip05g02103 160 PANTHER MYOSIN 111 159 - -
Aip05g02103 160 Gene3D Myosin VI head, motor domain, U50 subdomain 98 160 - -
Aip05g02103 160 PANTHER MYOSIN-9 111 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02103 Aip-Chr5 84620193 84621962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02103 111 159 Myosins gene family AT1G54560 81.633 7.64e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02103 K10357 - csv:101206606 88.1965