LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip05g02102	ATGGCTTCGTCGTCTCCGTCAATGGAAAGAAGGGTTGCCAGGGATGAAGATACCACTGGGGGCATGCGTGTCGCCGAGGAAGCAGAAATGTGCAACGGAGCAGACCATGGAGTTGGATCGTTTGAGGGCGAAGGCTTTGCAGGGATGGAGTTGGACGAGTACAATTTACAGGAAGATGAAACAGAACACGACCATCCGGTTGAGGGTGAAGGCTTTGCAGGGATGGAGTCGGACGAGTACGATTTACAGGAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTTGACAATGGGGATGCGGTTGAATTGGAAGACAATTTGGACTGCGTTGGACGAATGTCTAACAATTATGCGGATGATGACTTGTACGCTGTTGATTCCGGCGAATGGATAGGGTACCGATCCCCGAAGTTCTACTCAATGCCTAACCGGCAAAAGAGGCAGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACCTCGCATGGACGATGAATCAGGACGTTGGCACGTTGCGTACTTTTCAGACGCGCATAACCACCCCATTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATTGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACAACATGCGCAAAGGGGGCATTGGCGTCTCGTGA	663	0.5234	MASSSPSMERRVARDEDTTGGMRVAEEAEMCNGADHGVGSFEGEGFAGMELDEYNLQEDETEHDHPVEGEGFAGMESDEYDLQEDETEHDHHAEADVDNGDAVELEDNLDCVGRMSNNYADDDLYAVDSGEWIGYRSPKFYSMPNRQKRQRAETRCGCPARMLPRMDDESGRWHVAYFSDAHNHPILELRFSSMLPGHWRMSEADIEQMNNMRKGGIGVS	220

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip05g02102	220	Pfam	FAR1 DNA-binding domain	145	187	IPR004330	-
	Aip05g02102	220	MobiDBLite	consensus disorder prediction	1	22	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip05g02102	Aip-Chr5	84520332	84521315	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Aip05g02102		FAR1	2.5e-09	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip05g02102	-		-	ahf:112701185	275.018