Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02101 ATGTCGTCGCTCACGGATTTTCGCTTCTTCAAATTCATAATCCCCAACATGGATAATCAAATTAGAATGCCGCCGACCTTCTCCAACCTTGTCCGGGAGACCATTAGCAACCCCATTGAGATAAGCACCACAAATGGTCAGTCGTGGAGCATCTCGTGGGGCGTTGAGGAGGAGCATCCGCATCGAATCGTCTTCACCGGAGGGTGGCGGGACTTTTACGGACACTACCATCTTCGAATCGGTTCCATGATGCTATTATCGTATCACCAACCAAAGTTTTTCTATGTGACCATCCATGGCACAAGTTTCTGCGAGAACAACTATGAAAGAAACTTGCGACACGGAAGTCTTCCAGCAATACCCGCACATGGCAACTACACAGTCTAG 387 0.4832 MSSLTDFRFFKFIIPNMDNQIRMPPTFSNLVRETISNPIEISTTNGQSWSISWGVEEEHPHRIVFTGGWRDFYGHYHLRIGSMMLLSYHQPKFFYVTIHGTSFCENNYERNLRHGSLPAIPAHGNYTV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02101 128 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 4 109 - -
Aip05g02101 128 ProSiteProfiles B3 DNA-binding domain profile. 6 102 IPR003340 GO:0003677
Aip05g02101 128 SUPERFAMILY DNA-binding pseudobarrel domain 8 108 IPR015300 -
Aip05g02101 128 Gene3D - 2 104 IPR015300 -
Aip05g02101 128 PANTHER B3 DOMAIN-CONTAINING 4 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02101 Aip-Chr5 84456122 84456676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02101 8 108 B3 DNA Binding Superfamily AT4G01580 31.731 1.64e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02101 - - aip:110272038 276.174