Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02100 ATGTTATCAGTTAAATTTCTTGGTTTCTTTGGTTTTGATAAAACTTGCCGTCGCTATCACCATGGTCTTCCTCGAGCTTGCCGTCGCCGTCATGTTCGTCGAGAAGTCGTTGTCTTCCTCGACGCTGCTTTGAATGGCTTTTCCTTGAAAGGTTCAGAAAACCCTAACCTCCATCACGCCGCCATCTATCTCACCGTCGCCACCCTTGGCGCTCAAGATCGCAACCAGGTTCGTCCTAGCTGTTTTGCTTGTCGTCCCTCTCGCCCCTTCGGCATCCCCCTCCTTACGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGGCACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCGATAGGAAATCGAAAATCCTAACCTCCATCACGCCGCCATCTATCTCACCGTCGCCACCCTTGGCGCTCAAGATCGCAACCAGGTTCGTCCTAGCTGTTTTGCTTGTCGTCCCTCTCGCCGTTCTGGTCGGAAAGCTGCTCGCCTCTGTCTCGTGGTTCTGCTCGCCTCTATCTCACGGTTTTGCTCGCCAGGTCTTGCGGTTCTGCTCGCTAAGTCTCGCAGTTCTGCTCGCCGTGCTGCTCGAAGGTCAATGTGGCTCTCATGGGGTTTCTAGCCGAGATAATTCAAGCAAAAGCAAATTGAGGGATCTCTTTGACAGCTCGAAATACGTGCTTAGCTTTGGGAGTAAGTTCGTTGGCTCCTGTTGGACTATAGAGGCTTATACCTATATATCTAGCAACCTCTTCCACAAAACAAACAAATTGGGCATTATATCTCTTGATATCCTGTATTCTAAGGACTTAATTGCAACTGGCAGTATTGATACGAATGCTATTATTTTTGATAGACCATCAAGACAAATATTATCTACACTCAGTGGTCATTCTAAAAAGACAGTTCATGTGTGGCAAGGCTTGGAAGAAGGTAACTATAACTGCAAACACATCCCGAGGGATCATACAGCTGAGGGCAGTAATAAAAACAATGGAACTCATAATGGATGA 1146 0.4956 MLSVKFLGFFGFDKTCRRYHHGLPRACRRRHVRREVVVFLDAALNGFSLKGSENPNLHHAAIYLTVATLGAQDRNQVRPSCFACRPSRPFGIPLLTVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRHVCRPGHKGHDDLTSSSPSSGDRKSKILTSITPPSISPSPPLALKIATRFVLAVLLVVPLAVLVGKLLASVSWFCSPLSHGFARQVLRFCSLSLAVLLAVLLEGQCGSHGVSSRDNSSKSKLRDLFDSSKYVLSFGSKFVGSCWTIEAYTYISSNLFHKTNKLGIISLDILYSKDLIATGSIDTNAIIFDRPSRQILSTLSGHSKKTVHVWQGLEEGNYNCKHIPRDHTAEGSNKNNGTHNG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02100 381 MobiDBLite consensus disorder prediction 151 171 - -
Aip05g02100 381 AntiFam Antisense to 16S rRNA 89 124 - -
Aip05g02100 381 Gene3D - 284 370 IPR015943 GO:0005515
Aip05g02100 381 PANTHER BNAC09G29260D PROTEIN 82 140 - -
Aip05g02100 381 MobiDBLite consensus disorder prediction 142 171 - -
Aip05g02100 381 SUPERFAMILY WD40 repeat-like 267 351 IPR036322 GO:0005515
Aip05g02100 381 PANTHER - 82 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02100 Aip-Chr5 84440809 84445678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02100 277 370 U-box Gene Family AT1G04510 49.123 1.10e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02100 K10599 - gmx:100800213 134.42