Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02079 ATGATCTCCTATGGTGATGTTCTCCTCCGGCGGCGCATTCTCCTCCTCCGTCAAGATTTTCTCCAGATCTTTGGTGCTTCTTGGAAGAAGGATCAAACATTGTTAACACTGCTGTTCGCCAAGGTTGCCTGGGAACACATAGATTCTTTAGTTGAAAACTCTTGTATCAAAAGAGCAAGAACAAGAGAAGAATGGAAGAAGCAGCAGCCATGGTTGAAAACTTTCTCATTCTCTACTCTCATAGCTTCTCTTGCTATTAACTACCTTCACAGATTCCTTTTCACCTTCACCGTGAAGAAGAAGCAGCCATGGTTAACTCATCTTGTTGCAGTTGCTTGCATCTCTCTTGCTGCTAAAATGGAAGAGACACAAGTTCCACTTCCTCTTGATTTACAAGTGGAGGACAAAAAACATGTGTTTAAGGCAAAAACAATAAAGAAAATGGAGATTTTGGTACTTTCAACTCTTGAGTGGAAGATGAATCCACCAACACCTCTCTCTTTCATTGATTATATCACAAGAAGACTTAAATGTTTTCAATTCCTCAACACATGTCAATCTCTTCTTCTTTCTCTCTTACCAGGACCTCACAATATTCAGGGTATTGGGGCTGGTTTTGTGCCCAGGAATTTGAACTAA 639 0.4053 MISYGDVLLRRRILLLRQDFLQIFGASWKKDQTLLTLLFAKVAWEHIDSLVENSCIKRARTREEWKKQQPWLKTFSFSTLIASLAINYLHRFLFTFTVKKKQPWLTHLVAVACISLAAKMEETQVPLPLDLQVEDKKHVFKAKTIKKMEILVLSTLEWKMNPPTPLSFIDYITRRLKCFQFLNTCQSLLLSLLPGPHNIQGIGAGFVPRNLN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02079 212 SMART cyclin_7 70 154 IPR013763 -
Aip05g02079 212 Coils Coil 211 212 - -
Aip05g02079 212 Pfam Cyclin, N-terminal domain 74 161 IPR006671 -
Aip05g02079 212 PANTHER CYCLINS 27 193 IPR039361 -
Aip05g02079 212 SUPERFAMILY Cyclin-like 73 161 IPR036915 -
Aip05g02079 212 CDD CYCLIN 73 153 IPR013763 -
Aip05g02079 212 PANTHER CYCLIN D3.1 PROTEIN 27 193 - -
Aip05g02079 212 Gene3D - 68 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02079 Aip-Chr5 81458440 81459881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02079 30 208 Core Cell Cycle Gene Families AT4G34160 43.617 6.73e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02079 K14505 - aip:107615718 173.326