Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip05g02073 | ATGGGAGGTGAAGCTAACATAACTTACAAAGCTCTACCCCTGAAGAAGGAAATTAAGAAGTTGATACATCTTATTCTCCATGCAATTGTACTAATACTTGGAATAGTTGGAATTTGTGCTGCCTTCAAGAATCATAATGAAAGTGGCATCGCCAATATGTACAGCTTGCATTCATGGCTTGGCATTGGAGTTATTTCCCTTTATGCGATTCAGTGGATATTTGGGTTTGTGATGTTTTTCTATCCTGGAGGGAGTGAATCACTAAGAAACCAATCAATCCCATGGCAAGTGTTGTTTGGGTTGATAGTGTATGTTCTGGCACTTGGGACAGCTTCCCTTGGGTTCTTAGAGAAGCTCACATTCATGGAGAGTTTAGCAGACTTGTTTAAAGCTAAAATTCCTGTTTATATTGGAGATGATAGAACCGATGAAGATGCATTCAAGAAATTGAGAGACAGAGGACAAGGTCTTGGAATTCTTGTCTCAAAATTTCCGGAAGACACTAATGCATCGTACTCTTTACAGAACCTAATGAGGCAAAAACTCGTCATGTACAAAGCAGTCATTCAGAAACTCATCATGTACAAAGCAGCGGCTGCAATAACAGCAGCAGCAACCCCAGCTGTGGAAGGATCAAAACAAGAACAAAAATGCTCTTCAACAACAGTCTCTAAAATAATGTATCTTTATTTGTTTTTGGATTTCTTAATGTAG | 714 | 0.3894 | MGGEANITYKALPLKKEIKKLIHLILHAIVLILGIVGICAAFKNHNESGIANMYSLHSWLGIGVISLYAIQWIFGFVMFFYPGGSESLRNQSIPWQVLFGLIVYVLALGTASLGFLEKLTFMESLADLFKAKIPVYIGDDRTDEDAFKKLRDRGQGLGILVSKFPEDTNASYSLQNLMRQKLVMYKAVIQKLIMYKAAAAITAAATPAVEGSKQEQKCSSTTVSKIMYLYLFLDFLM | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip05g02073 | 237 | Pfam | Eukaryotic cytochrome b561 | 3 | 121 | IPR006593 | - | |
| Aip05g02073 | 237 | Pfam | Trehalose-phosphatase | 131 | 175 | IPR003337 | GO:0003824|GO:0005992 | |
| Aip05g02073 | 237 | ProSiteProfiles | Cytochrome b561 domain profile. | 1 | 153 | IPR006593 | - | |
| Aip05g02073 | 237 | CDD | Cyt_b561_ACYB-1_like | 2 | 123 | - | - | |
| Aip05g02073 | 237 | Gene3D | - | 1 | 137 | - | - | |
| Aip05g02073 | 237 | PANTHER | CYTOCHROME B561-RELATED | 1 | 124 | IPR043205 | GO:0016491 | |
| Aip05g02073 | 237 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 | 1 | 124 | - | - | |
| Aip05g02073 | 237 | SMART | 561_7 | 1 | 115 | IPR006593 | - | |
| Aip05g02073 | 237 | SUPERFAMILY | HAD-like | 117 | 176 | IPR036412 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip05g02073 | Aip-Chr5 | 79874760 | 79877259 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip05g02073 | 1 | 124 | Chloroplast and Mitochondria Gene Families | AT4G25570 | 67.742 | 4.10e-60 | 189 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip05g02073 | K08360 | - | fve:101295085 | 165.236 |