Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02069 ATGTATACATTCTGGAATGTCACAGAAAGAAAGGTTGAAACGATACAAAGGCTTCAAAGAAGGGGGCAAAGGATACTTATGACAACAGAGTTAGTAGAAAGGGGTATCGACATAGAATGGGTTAACATAGTTATCAACTATGACATACCTGATTCTGCTGACAATTACTTGCACAGGGAAGAACTGGTAGATTTGGAACCAAGGGACTTACAATTACTTTCGTGTCTTCGGCGGCTGAAACTAAAAGAGCATTTAGTTCAAGGATAA 267 0.3895 MYTFWNVTERKVETIQRLQRRGQRILMTTELVERGIDIEWVNIVINYDIPDSADNYLHREELVDLEPRDLQLLSCLRRLKLKEHLVQG 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02069 88 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 60 IPR027417 -
Aip05g02069 88 Pfam Helicase conserved C-terminal domain 10 59 IPR001650 -
Aip05g02069 88 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 17 59 - -
Aip05g02069 88 Gene3D - 6 60 IPR027417 -
Aip05g02069 88 PANTHER BNAC04G43400D PROTEIN 17 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02069 Aip-Chr5 79727726 79728462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02069 9 59 Eukaryotic Initiation Factors Gene Family AT5G11200 58.824 2.51e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02069 K12812 - gmx:100785358 63.5438