Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02068 ATGAAAGCAATCCAATTCCATGTGCCTAGGTTGTACTATGACACATTTCATCCCACAATCCACTTCCAGATACCATCATCATCATTATCACTCCCTAAACCAATGATCTCCCGCTACAGCATAGTCCAATCTCACCACCCCAACTTCACAATCTCATACCTGATTGACTCATGTGGTCTCTCTCCAGACACTACTGCTCTTACTTCCCAAAATCTTCACCTTCCTTCTGCTGAAAGACCAGACTCAATTCTCACCCTTCTCAGGGAGCATGGTTTCACAGATACCCAGATTTCAAACCTCATCAGAAAACGCCCATTGCTCCTCTTAGTAAACCCAGATATCCTCTTGCCAAAGTTTCAATTTTTCCTCTCCATTGGGATTTCCAATACCAACCTCGCAAGAACCCTAACCGCTGACCCAACCCTTTTGACCCGGAGCTTGGAGAAACAGATCATACCCTCTTACAATTTCCTCAAGAGTGTGTTGATTTCTGATGAAAAGGTTGCAGCTTCATTGAAGCGCACATCTTGGGTCTTCCTCGAGGATCACAAGAAGAACCTCGTACCAAACCTCAATCTCCTAAAAGAGATGGATGTTCCTGAATCATGTGTTACGCTGTTGCTGACTCATTTTCTGGAGGCATTGATGCAGAAAAAGGAAAACTTTGCAAAGCTTTCTAAGGAGATTAAAGAAATGGGATTTAATCCAAAAAAGACAACATTTGTGTTGGCCATTCATGTGCTCTCAGGTGAGGGTAACAAATCCATATATAACCGCTGTTACGAGGTTTATAAGAGGTGGGGTTGGTCAGATGATGACATCCTTATGGCATTCAAGAAGCACCCACTTTGTATGATACTTTCAGAGGATAAGATAATGAAGACAATGGATTACTTGGTGAATAAGATGGGTTGGACTTCAGGGATGATTGTTAGGTGCCCAGTTGTGTTGTTTTTCAGCTTGGAGAAGAGGATTAAACCTAGGTGCTCTGTTGCTAAGGTTTTGTTGATGAAGGGATTGATTAAGAGGAAGTTGAGCTTGTCCACTTTGCTGTTGCCTGATGAGGACAGTTTCTTAGAGAAGCATGTGATCAAGTATGAGCTGCAGGTGAAGGGTGGTGGAACAAGGATTCAACGATGCTCCTGTTTGATCAACGCAACAGATCTGGGAAGGTAA 1176 0.4303 MKAIQFHVPRLYYDTFHPTIHFQIPSSSLSLPKPMISRYSIVQSHHPNFTISYLIDSCGLSPDTTALTSQNLHLPSAERPDSILTLLREHGFTDTQISNLIRKRPLLLLVNPDILLPKFQFFLSIGISNTNLARTLTADPTLLTRSLEKQIIPSYNFLKSVLISDEKVAASLKRTSWVFLEDHKKNLVPNLNLLKEMDVPESCVTLLLTHFLEALMQKKENFAKLSKEIKEMGFNPKKTTFVLAIHVLSGEGNKSIYNRCYEVYKRWGWSDDDILMAFKKHPLCMILSEDKIMKTMDYLVNKMGWTSGMIVRCPVVLFFSLEKRIKPRCSVAKVLLMKGLIKRKLSLSTLLLPDEDSFLEKHVIKYELQVKGGGTRIQRCSCLINATDLGR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02068 391 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 30 370 - -
Aip05g02068 391 SMART mt_12 307 338 IPR003690 GO:0003690|GO:0006355
Aip05g02068 391 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Aip05g02068 391 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Aip05g02068 391 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Aip05g02068 391 SMART mt_12 98 128 IPR003690 GO:0003690|GO:0006355
Aip05g02068 391 Pfam mTERF 256 358 IPR003690 GO:0003690|GO:0006355
Aip05g02068 391 Pfam mTERF 84 235 IPR003690 GO:0003690|GO:0006355
Aip05g02068 391 PANTHER CGI-12 PROTEIN-RELATED 30 370 IPR003690 GO:0003690|GO:0006355
Aip05g02068 391 Gene3D Transcription termination factor 3, mitochondrial 145 369 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02068 Aip-Chr5 79103491 79104666 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip05g02068 mTERF 5.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02068 K15032 - ahf:112805356 479.944