Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02063 ATGTCCCTCCATGACTCAACACCCGTCACGTTGCCGTCTCCCTCTCTGAAGTCGTTGTGCTGCCGTCTCCCTCTCCCTCACTCTTCATACCTCCGTTTCCCTCTCTCAACCTTCCTCCTCACCACCTGTCTGTGCCAACTGTCATCCACATTCAGTGTTCGCAACGCCATGGACCGGCCACAAGCACGATCAGTTTTTAAAATCTATGTCCAAATATGGCAGGCTCAGTATAAGTTCCACAGAGCTTCTAAATACTACAAGAGGCTTAAGGTAGGAGCAATAGTCGCACAATGTAGATGGAGGGGGAAGATGGCCAGGAGAGAACTCAGGAAACTGAAGATGGCTACAAGGAAAATTGGTGCACTTCAAGAAGCAAAGGACAAACTTGAAGAAAAGGTGGAAGAACTCACCTGGCATCTCCAAGGAAAAAAGTCCAAAGCACAAGAGATATCGAAACAACAGAATTCATTACAGGAGATGCAGGGTAAACTTAATGAAACCAATGCTCTGCTTGTCAAGGAGCGAGAGAATGTAAAGAAGGTTACCATTGAAGCAACTCCGGTTATCCAAGAAAAGGAGGTTATTGTTGAAGACACTACAAAGATTGATGCACTAACAGTAAAAGTTGAGAGGCTCAAAGAGCGAGAGAATGTAAAGAAGGTTACCATCGAAGCAACTCCGGTTATCCAAGAAAAGGAGGTTATTGTTGAAGACACTGCAAAGATTGACGCACTAACAGCGGAAGTTGAGAGGCTAAAGACTTCCCTTGAGACGGAAAAACAGAAAGCTGATGAATTTGAAAAGAAATATAATGAAATCCGAGTGAAGAGTGAAGAAAAGATTCACAAATTAGAAGACACAGAGAAGAAGGTTCGTCAGCTCCAAGAATCATTGCACAGGAGAATAATGATGTCTTGGCTTATTGGTTATCTAATGCTTCTACGCTTCTCATTACTCCAGCGTACCCTTAAAGTGAGTGGTGCAGTTGGAATGGCTCCTCAACGCCGTCGTTCTTCATCAGCAGCCCTATTTGGAAGGATGACACAAAGTTTCTGTGCAGCACCAGGGGGAGTGAACCTTTCCCTCATCAATAGTGGCATGAATGGTGGAGTGGATGCATTAAGACAATTTGAAGCCAAGTATACAACTAGTATAGAACTTAATTAA 1167 0.4387 MSLHDSTPVTLPSPSLKSLCCRLPLPHSSYLRFPLSTFLLTTCLCQLSSTFSVRNAMDRPQARSVFKIYVQIWQAQYKFHRASKYYKRLKVGAIVAQCRWRGKMARRELRKLKMATRKIGALQEAKDKLEEKVEELTWHLQGKKSKAQEISKQQNSLQEMQGKLNETNALLVKERENVKKVTIEATPVIQEKEVIVEDTTKIDALTVKVERLKERENVKKVTIEATPVIQEKEVIVEDTAKIDALTAEVERLKTSLETEKQKADEFEKKYNEIRVKSEEKIHKLEDTEKKVRQLQESLHRRIMMSWLIGYLMLLRFSLLQRTLKVSGAVGMAPQRRRSSSAALFGRMTQSFCAAPGGVNLSLINSGMNGGVDALRQFEAKYTTSIELN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02063 388 PANTHER MYOSIN 29 300 - -
Aip05g02063 388 PANTHER MYOSIN 317 382 - -
Aip05g02063 388 PANTHER MYOSIN-9 29 300 - -
Aip05g02063 388 PANTHER MYOSIN-9 317 382 - -
Aip05g02063 388 Coils Coil 195 215 - -
Aip05g02063 388 Coils Coil 235 297 - -
Aip05g02063 388 ProSiteProfiles IQ motif profile. 89 118 IPR000048 GO:0005515
Aip05g02063 388 Coils Coil 112 177 - -
Aip05g02063 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 119 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02063 Aip-Chr5 76653656 76658898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02063 320 381 Myosins gene family AT1G54560 75.806 6.63e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02063 K10357 - gmx:100816792 243.047