Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02061 ATGCCACTGCTGATCAAAACTGTGCGACACTATCGCAGGTTGCATCCAAAAAAAGTTCAGGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGATTCTGTCACTGTCTCCCGTGAGAAGAACAAGAGAGGATTAAGGATCCAAAATGAGGTCTGTGCCCTTCATTTCAGTCGGAATCAGTTGCGCTCAATGGGATAA 219 0.4612 MPLLIKTVRHYRRLHPKKVQEKFLQERIKVGGKAGALGDSVTVSREKNKRGLRIQNEVCALHFSRNQLRSMG 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02061 72 Gene3D - 12 71 IPR038526 -
Aip05g02061 72 Pfam Ribosomal L22e protein family 20 58 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02061 Aip-Chr5 75047539 75048687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02061 21 49 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 89.655 2.18e-12 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02061 K02891 - csin:114291651 59.3066