Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02057 ATGGGTTACGAAGACGATCCGTACCGCGATGAGGACGGAGAACCCTTGATGGATTACGACGACATTCAATCCGATCCCGATCCCGAGCCCCACCACGACGATGCGCTCCTCGATGATTACGAGGACGAAGGAGACGGTGGCGATTGGCGACGCCGCGAGCGGTCGCAGACTCCGGTCTACGACAACGATTCGTCCAAGTCGAAGCCCAGGAAGAGGCTCATCAAGAAGGGAGACACCGGGAGGCAGTCGGTGGCGCCGGAGCTCGAAGATGAGGTGGCGGAGGATGAGTATGAAGGTGGGGCGAGGTTCGCGAGGGAGGGTTCGGAGGAAGGGAGGAAGAGGAAGAAGGGGAAGGAGGGTGGAACGTTTGGTGGAAAAGGAGGCAAAGATCATGACGGTGAAGTTAAGGAGATGTGGGATACTATTGCTGGCGGTGATTCTGAGGATGATCATGAGGGTGTTAGGAACGTGGATGATGACAACTTCATAGATGACACGGGGGTGGAAGCTGGTGGTTACTATGGCAGTGATGAACCTCGTTCTCCTGGTGATGCTCCCCAGGCAGAGGAAGGTGAAGAGGATGATGAAATTAAGGATCTTTTCAAGATAGGTAAGAAAAAGAAGAAGAATGAGAGAAGTCCTGCAGAAATAGCTTTATTAGTTGAGAACGTCATGGCTGAGCTTGAGGTCACAGCTGAAGAGGATGCTGAACTTAATAGACAGGGGAAGCCTGCTATTAATAAACTAAAGAAGTTGGATCTTCTAACAGAAGTCCTCTCAAAGAAACAGCTCCAATTAGAGTTTTTGGACCATGGAGTACTAACTTTGTTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGCTTGCCAAATATCAACATACGCACAGCAATTTTGAATATTTTAAATGATTTTCCTATTGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGGAAGGTTGTGATCATGTTCTTATCGAAGTCTGACGAAGAAATCAATGTAAATAGAAAACTAGCTAAGGAACTGGTTGACAAATGGAGCCGACCCATATTTAATAAGAGTACACGGTTTGAAGACATGAGAAATGCTGAGGAAGACAGGATTCCTTTCAGGAGGCCAACTGTTAAAAAGCTGGCCAATAAAGCAGCAGGGTTGGAATCTAGAGATGGTGATCTTGATTTGGAGTTTTCACAGCCTAGGTCTGGACAGTCTTCTTCAAGGCAACATGCATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGTCCCCAGTCTAAAATTGATCCAGAAGAAGTTAGAGCGCGAGCAAAAGCTGCTGCACAAGATCAGCAGAGAATGAAGATGAATAAGAAGTTGCAGCAGTTGAGGGCACCAAAGAAGAAGCAGCTTCAAGCTACGAAACTAAGTGTGGAAGGTCGTGGCATGATCAAATATTTGTAA 1461 0.4709 MGYEDDPYRDEDGEPLMDYDDIQSDPDPEPHHDDALLDDYEDEGDGGDWRRRERSQTPVYDNDSSKSKPRKRLIKKGDTGRQSVAPELEDEVAEDEYEGGARFAREGSEEGRKRKKGKEGGTFGGKGGKDHDGEVKEMWDTIAGGDSEDDHEGVRNVDDDNFIDDTGVEAGGYYGSDEPRSPGDAPQAEEGEEDDEIKDLFKIGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLDLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVVIMFLSKSDEEINVNRKLAKELVDKWSRPIFNKSTRFEDMRNAEEDRIPFRRPTVKKLANKAAGLESRDGDLDLEFSQPRSGQSSSRQHASRPEATPLDFVIRPQSKIDPEEVRARAKAAAQDQQRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMIKYL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02057 486 MobiDBLite consensus disorder prediction 1 195 - -
Aip05g02057 486 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 214 362 IPR035441 -
Aip05g02057 486 MobiDBLite consensus disorder prediction 44 68 - -
Aip05g02057 486 MobiDBLite consensus disorder prediction 403 418 - -
Aip05g02057 486 MobiDBLite consensus disorder prediction 1 23 - -
Aip05g02057 486 MobiDBLite consensus disorder prediction 395 471 - -
Aip05g02057 486 PANTHER PROTEIN IWS1 HOMOLOG 1 1 486 - -
Aip05g02057 486 PANTHER PROTEIN IWS1 HOMOLOG 1 1 486 IPR044204 GO:0009742|GO:0032784
Aip05g02057 486 Pfam TFIIS helical bundle-like domain 301 356 IPR017923 -
Aip05g02057 486 MobiDBLite consensus disorder prediction 431 447 - -
Aip05g02057 486 MobiDBLite consensus disorder prediction 97 162 - -
Aip05g02057 486 Coils Coil 221 241 - -
Aip05g02057 486 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 270 360 IPR035441 -
Aip05g02057 486 ProSiteProfiles TFIIS N-terminal domain profile. 275 359 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02057 Aip-Chr5 74788337 74791596 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aip05g02057 Med26 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02057 K17498 - gmx:100801805 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02057 05 74788337 74791596 Aip03g03173 03 102380832 102385082 PCT