Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02053 atgtataatagtccTAGAGAGCTTCTGGATCGAGCCACCTCTTCTGTCAATGCGTTTTTAGATCAGTTCTCTTCTCTATACTGTCGTTTCTGCCACTGCTGCCTCCGCAGTTTCCACCACCATTGTCGCCACAGTTTCAGCCATCGATGCTACCGTAGTTGCCATGCCCTCCGATTCCAAAGGAACTATCCTCTGTTAATGGGTACATGGAAGGTTGCCCCTGCTCTGGTAGCTGGTTGTGTTGCAATATTGAAGCCTTCCGAATTGGCATCTGTGACATGTTTGGAGTTGGCTGACATATGCAAAGAAGTGGGCCTTCCTCCGAGTTCTAAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCTCTTTGGGAAGAAAATTATGGAGCTTGAGGAGGAAAAAAGAAAAGTGCAGAAATCTCAAGATGTTCATGGCCAAAAATTGAAAGCACTGGAAGCACAGGTCCAATTGCAGCATAAAATGAAGCAAAAGGCAGAACAATTTCGACAATGGAAAGCTTCTCGAGAAAAGGAGTTACTTCAGCTGAAAAGATTTGCTTGGAGAGAACTGCAAATAGCTACAGACAACTTTAGTGAGAGAAATGTTTTAGGACAGGGAGGCTTTCAGAAGGTTTATAAAGGTGTTCTACCCGATGGCACAAAAATTGCTGTTAAAAGAGAGTATAAGCAGGAACTGTCCCACTATGGTCAAAAGATCAACATCATCCTTAGCAAACTCAGGAAGCAAATCACTCTCTGCAATCTACAGATAGAGGAGGCAGAATATATTCGCAAGCTCATGAAACTTTTCGAGGTTGCCTATCATCTTTGA 840 0.4274 MYNSPRELLDRATSSVNAFLDQFSSLYCRFCHCCLRSFHHHCRHSFSHRCYRSCHALRFQRNYPLLMGTWKVAPALVAGCVAILKPSELASVTCLELADICKEVGLPPSSKMKRIGIDTEALKELFGKKIMELEEEKRKVQKSQDVHGQKLKALEAQVQLQHKMKQKAEQFRQWKASREKELLQLKRFAWRELQIATDNFSERNVLGQGGFQKVYKGVLPDGTKIAVKREYKQELSHYGQKINIILSKLRKQITLCNLQIEEAEYIRKLMKLFEVAYHL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02053 279 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 62 109 - -
Aip05g02053 279 SUPERFAMILY ALDH-like 62 125 IPR016161 GO:0016491
Aip05g02053 279 SUPERFAMILY Protein kinase-like (PK-like) 183 244 IPR011009 -
Aip05g02053 279 Pfam Sieve element occlusion N-terminus 229 275 IPR027942 -
Aip05g02053 279 Gene3D Phosphorylase Kinase; domain 1 169 258 - -
Aip05g02053 279 Pfam Aldehyde dehydrogenase family 62 109 IPR015590 GO:0016491
Aip05g02053 279 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 125 IPR016162 GO:0016491
Aip05g02053 279 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02053 Aip-Chr5 73933940 73938491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02053 62 125 Aldehyde Dehydrogenase Gene Family AT3G48170 70.312 1.09e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02053 K00130 - ahf:112750268 421.009