Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02041 ATGATAGATTGGATACATCAGTTGAAGCTTCCAAGTGGCTGCAACACCGCAATGAAGGCAGAGGATGCTGCTAGAGCCTATGATGAAGCAGCTAGGCTTATGTGTGGTGCAAGAGCAAGAACCAATTTCCCTTTCAATCCTAACACTACCAACAACAATGTCTCTCAATCTTCTTCTTCAAAGCTTCTCTCACCAACTTTGACCGCAAAATTGCACAGATGCTACATGGCTTCTTTGCAATTAACTCGGCAACAAGATCCTCAAAGGGTAAATGATAATCATAATAATAGTAACTACTCCAAAGAGCAAATTAGTGAAAAGGGTGATTCAATTGTGTCATCAAAAAAGAGAACACATGATGAGAAAGACGTAAAACAAGATTCAGAGTCCAATTGA 396 0.3965 MIDWIHQLKLPSGCNTAMKAEDAARAYDEAARLMCGARARTNFPFNPNTTNNNVSQSSSSKLLSPTLTAKLHRCYMASLQLTRQQDPQRVNDNHNNSNYSKEQISEKGDSIVSSKKRTHDEKDVKQDSESN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02041 131 Gene3D AP2/ERF domain 15 45 IPR036955 GO:0003700|GO:0006355
Aip05g02041 131 MobiDBLite consensus disorder prediction 40 62 - -
Aip05g02041 131 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE 17 122 - -
Aip05g02041 131 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 17 122 - -
Aip05g02041 131 MobiDBLite consensus disorder prediction 80 107 - -
Aip05g02041 131 SUPERFAMILY DNA-binding domain 19 45 IPR016177 GO:0003677
Aip05g02041 131 SMART rav1_2 11 50 IPR001471 GO:0003700|GO:0006355
Aip05g02041 131 MobiDBLite consensus disorder prediction 108 131 - -
Aip05g02041 131 MobiDBLite consensus disorder prediction 42 62 - -
Aip05g02041 131 MobiDBLite consensus disorder prediction 80 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02041 Aip-Chr5 71223779 71224921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02041 4 79 AP2-EREBP Transcription Factor Family AT5G25190 61.728 4.59e-27 97.4