Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02038 ATGCAAAACTCGAGGCAACAACAACCCTCTTCCTTCTTCATTTCTTCTTATTCATTCTTTTGTTTCATTCTTCTCTTTCACACTACTTTTCTCTATGGTGTTGCATTCTGTTCTACGAACAGTAACAACAACGAAGCTTCTGCTCTATTTTCGTGGCTCCATAGTTCTTCTTCACCACCACCGTTGTTATTGTCCAACTGGAACATCCATGACTCAAACCCATGCAACTGGACCTGCATAACATGTTCCACACTCGGTTTTGTAACTGAGATCACCATAGAATCCACCCCTCTTGAGCTTCCACTACCTCCAAACCTTTCTTCATTCAAGTTCCTTCAGAAGCTTGTCATCTCTGATTCAAATCTCACCGGACAAATCCCTCAAGACATTGGTGACTGCACTTCACTCACTGTTGTTGACTTAAGCTCTAACAACCTTGTTGGTTCAATACCTTCCACCATTAGAAAGCTTCACAATCTTGTCAACTTGTCCTTGAACTCTAATCAGCTTTCGGGGAAGATCCCAGTCGAGTTAAGCAACTGCATTGGACTTAAGAGTCTTCTCCTTTTTGATAACCAGCTTAGTGGGGTTATCCCAAAGGAGCTTGGAAAGTTGTCGAATCTTGAGGTTCTTAGAGCCGGAGGGAACAAAGACATAGTTGGTAAGATACCTGAAGAGTTTGGAGAATGCAGCAATTTAACAGTGTTGGGGCTAGCTGATACAAGAATCTCAGGCTCATTGCCAGTTTCATTGGGAAAACTAAGCAAGCTTCAAACTCTGTCAGTTTACACCACAATGCTCTCAGGTGAGATTCCAAGAGAGTTAGGTAACTGTTCTGAGCTTGTTGATTTGTTCCTCTATGAGAATAGCCTCTCAGGTTCCATTCCACCTGAGCTTGGAAAGCTTCAGAATCTGCAACAGTTGTTTCTATGGCAGAATAGTCTTGTTGGTGCTATACCCGAAGACATTGGAAACTGCACAAGTTTGAGAAAAATTGACTTCTCATTGAATTCTATATCTGGAACCATTCCTCTGTCTTTAGGGAATCTTTTGAATCTTGAAGAGTTTATGATTAGTGACAACAACGTGTCTGGCTCGATACCTTCGTTGCTCTCCAATGCAAAGAACCTTCAGCAGTTGCAAGTTGATACAAACCAGCTTTCAGGTTTGATTCCACCCGAGCTAGGCCGGTTGTCAAACCTAATGGTGTTTTTCGCTTGGCAGAACCAGCTTGAAGGTAGCATTCCATCAAGTTTAGGAAACTGCAGCACCCTGCAGGCACTGGACTTGTCTCGAAACACGCTAACTGGAAGCATTCCGGCAAGCCTATTTCGCCTCCAGAACTTAACAAAGCTGCTTCTTATCTCAAACGACTTATCAGGATCTATACCTCCAGAGATAGGTAGCTGCAGCTCTCTTGTAAGGTTGAGGCTTGGAAACAACAGAATCACTGGTAGTATTCCCAAGACCATAGGCAGCCTCAAGAGCTTAAACTTTCTTGATCTCTCCGGGAACCAGCTTTCAGGGCCGGTTCCTGAAGAGATAGGAGGCTGCTCAGAGCTGCAAATGATAGACTTGAGTGGCAACAACTTAGAAGGACCGTTGCAAAATTCTCTGTCAACACTTTCTTCCCTTCAAGTATTGGATGCATCTTCCAACAAGTTTTCAGGTCCAGTGCCTGCGAGTTTGGGCCACCTTGTATCTCTAAGCAAGCTTATCTTAGGAAAGAACTTGCTTTCCGGACTGATTCCAGGGTCGCTGAGCCTATGTTCAAATCTGCAATTGCTTGATCTTAGCAGTAATCAGCTCACCGGTAGCATACCGGCCGAGCTAGTCCGGATGGAGTCTCTAGAAATCGCTCTCAATCTGAGCTGCAATTTTCTCAGTGGGAAAATCCCGGCTCAGATATCTGCACTTAGCAAGCTTTCCATGTTAGACCTTTCACATAACCAGTTGGAAGGGAATTTGCAGCCTTTGGAAGAGTTAGACAATCTTGTCTCCCTTAATGTTTCGTACAACAAGTTCTCCGGTTATCTTCCGGATAACAAGCTTTTCAGGCAGTTATCGCCGAAAGACCTCGCTGGAAACCAAGGCCTGTGCACATCAGGTCAGGACTACTGCTTTGTGAAAGACTCTGGCACGGCCTTGAATGCGAACGAGGCAAAGAAGTCTCGAAGGATTAAAGTGGCTATTTGTTTACTCATTGCTCTAACTGTGATAATGATTGTTATGGGAATAACTGCTGTAATAAAAGCCAGAAGAACAATTAGAGATGATGATTCAGAGTTAGGAGAATCATGGTCATGGCAATTCATACCATTCCAGAAGCTGAATTTCACGGTTGAGCAAGTACTAAGGCGTTTGGTTGACAGGAATATAATCGGAAAAGGATGCTCCGGCGTAGTGTATCGTGCCGAGATGGACAGCGGAGAAGTGATTGCAGTGAAGAAGCTGTGGCCTACAACAGATGCAGGGGAGGTGTTAGATGAAAAGACAGGAGTTCGTGATTCTTTCTCGGCCGAGGTGAGGACTCTCGGGTCGATCCGCCACAAGAACATTGTGAGGTTCTTGGGATGCTGCTGGAACAGAAAAGCCAGATTGCTTATTTTCGATTACATGCCGAATGGGAGCTTAAGCAGTTTGCTCCATGAGAGGACTGGGACTTGTTTGGAATGGGAATTGAGGTATAGAATCTTGTTGGGTGCTGCTCAAGGAATTGCATATCTTCATCATGATTGTGTTCCTCCTATAGTTCATAGAGATATCAAAGCCAATAACATCCTCATTGGCATTCAATTTGAGCCTTATATTGCTGATTTTGGCTTGGCTAAGCTAGTTGACGACGGCGATTTCGGCAGATCTTCCAATACCGTTGCCGGTTCTTATGGATACATTGCTCCAGAATATGGCTACATGATGAAGATCACAGAGAAAAGTGATGTGTATAGCTACGGAATAGTTTTGTTAGAAGTCTTGACAGGAAAGCAACCGATCGATCCAACAATCACGGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAAAGGGCTTGATGTTCTTGATCCTAGGTTACTCTCTAGGCCAGAATCAGAAATAGAGGAAATGATGCAAGCTTTGGGAATAGCCATGTTATGTGTAAATCCGTCCCCAGAAGAAAGGCCGACGATGAGAGATATCGCCGCGATGCTCAAGGAGATAAGGCAAGAAAGGGAGGAGTCTGCGAAATTCGACGCACTTCTAAAGGATTCGCCTGCGAATGAGGGCAATAAATGTTCTTCTGGTGGAGTTATGGCAGCATCTTCGACGGTGCCAGTGATGCAACGTTTGAATTCAAAGATTAATAATAACACGAGCTTCTCTGTGTCTTAA 3372 0.4419 MQNSRQQQPSSFFISSYSFFCFILLFHTTFLYGVAFCSTNSNNNEASALFSWLHSSSSPPPLLLSNWNIHDSNPCNWTCITCSTLGFVTEITIESTPLELPLPPNLSSFKFLQKLVISDSNLTGQIPQDIGDCTSLTVVDLSSNNLVGSIPSTIRKLHNLVNLSLNSNQLSGKIPVELSNCIGLKSLLLFDNQLSGVIPKELGKLSNLEVLRAGGNKDIVGKIPEEFGECSNLTVLGLADTRISGSLPVSLGKLSKLQTLSVYTTMLSGEIPRELGNCSELVDLFLYENSLSGSIPPELGKLQNLQQLFLWQNSLVGAIPEDIGNCTSLRKIDFSLNSISGTIPLSLGNLLNLEEFMISDNNVSGSIPSLLSNAKNLQQLQVDTNQLSGLIPPELGRLSNLMVFFAWQNQLEGSIPSSLGNCSTLQALDLSRNTLTGSIPASLFRLQNLTKLLLISNDLSGSIPPEIGSCSSLVRLRLGNNRITGSIPKTIGSLKSLNFLDLSGNQLSGPVPEEIGGCSELQMIDLSGNNLEGPLQNSLSTLSSLQVLDASSNKFSGPVPASLGHLVSLSKLILGKNLLSGLIPGSLSLCSNLQLLDLSSNQLTGSIPAELVRMESLEIALNLSCNFLSGKIPAQISALSKLSMLDLSHNQLEGNLQPLEELDNLVSLNVSYNKFSGYLPDNKLFRQLSPKDLAGNQGLCTSGQDYCFVKDSGTALNANEAKKSRRIKVAICLLIALTVIMIVMGITAVIKARRTIRDDDSELGESWSWQFIPFQKLNFTVEQVLRRLVDRNIIGKGCSGVVYRAEMDSGEVIAVKKLWPTTDAGEVLDEKTGVRDSFSAEVRTLGSIRHKNIVRFLGCCWNRKARLLIFDYMPNGSLSSLLHERTGTCLEWELRYRILLGAAQGIAYLHHDCVPPIVHRDIKANNILIGIQFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGIVLLEVLTGKQPIDPTITDGLHVVDWVRQKKGLDVLDPRLLSRPESEIEEMMQALGIAMLCVNPSPEERPTMRDIAAMLKEIRQEREESAKFDALLKDSPANEGNKCSSGGVMAASSTVPVMQRLNSKINNNTSFSVS 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02038 1123 ProSiteProfiles Protein kinase domain profile. 788 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02038 1123 PRINTS Leucine-rich repeat signature 593 606 - -
Aip05g02038 1123 PRINTS Leucine-rich repeat signature 639 652 - -
Aip05g02038 1123 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 21 1122 - -
Aip05g02038 1123 Pfam Protein kinase domain 791 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02038 1123 Gene3D Ribonuclease Inhibitor 41 244 IPR032675 -
Aip05g02038 1123 ProSitePatterns Protein kinases ATP-binding region signature. 794 817 IPR017441 GO:0005524
Aip05g02038 1123 SUPERFAMILY L domain-like 57 409 - -
Aip05g02038 1123 SUPERFAMILY L domain-like 391 705 - -
Aip05g02038 1123 Gene3D Transferase(Phosphotransferase) domain 1 873 1086 - -
Aip05g02038 1123 SMART LRR_typ_2 302 326 IPR003591 -
Aip05g02038 1123 SMART LRR_typ_2 566 589 IPR003591 -
Aip05g02038 1123 SMART LRR_typ_2 639 669 IPR003591 -
Aip05g02038 1123 SMART LRR_typ_2 494 518 IPR003591 -
Aip05g02038 1123 SMART LRR_typ_2 542 565 IPR003591 -
Aip05g02038 1123 SMART LRR_typ_2 157 181 IPR003591 -
Aip05g02038 1123 SMART LRR_typ_2 446 470 IPR003591 -
Aip05g02038 1123 SMART LRR_typ_2 590 614 IPR003591 -
Aip05g02038 1123 Gene3D Ribonuclease Inhibitor 439 534 IPR032675 -
Aip05g02038 1123 ProSiteProfiles Leucine-rich repeat profile. 641 663 IPR001611 GO:0005515
Aip05g02038 1123 Gene3D Phosphorylase Kinase; domain 1 772 872 - -
Aip05g02038 1123 Pfam Leucine rich repeat N-terminal domain 42 83 IPR013210 -
Aip05g02038 1123 Gene3D Ribonuclease Inhibitor 535 615 IPR032675 -
Aip05g02038 1123 SMART serkin_6 788 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g02038 1123 SUPERFAMILY Protein kinase-like (PK-like) 765 1064 IPR011009 -
Aip05g02038 1123 Gene3D Ribonuclease Inhibitor 342 438 IPR032675 -
Aip05g02038 1123 Gene3D Ribonuclease Inhibitor 616 707 IPR032675 -
Aip05g02038 1123 Gene3D Ribonuclease Inhibitor 245 341 IPR032675 -
Aip05g02038 1123 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 21 1122 - -
Aip05g02038 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 917 929 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02038 Aip-Chr5 70551660 70555737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02038 64 1092 Receptor kinase-like Gene Family AT5G56040 49.234 0.0 978
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip05g02038 Pkinase 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02038 - - gmx:100818541 1687.16