Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02027 ATGAAGGAAGACGAGCAAGAAAGAAGAAACAAGAGTGCCACAGTTACAAACCCCATAAACAATAAAAGGCAACACAAGCTACTTTGTCTTCTTTATCCGCAAGCAGCACTGGTGCTTAATGCTTCTTGTCGATTTCGTTACACCTTGGACTTGAAAAAACAAGAAGAGAAGACACAAATATTGAGAAAGATTAGAGCTCATGCACAAGCCATTAGGGCAGCATATCTTTTCAAAGCAGCCGGGGATGGTCAAGTGATTGAAACCACAAAGCCTCCTGTGGCCTCTGCTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAGTTTCAAGGGAGCATGATACCGTTGCTCTTCAGCAATATGGAGGGGTTGCTGGGATATCAAATTTGTTGAAAACCAATTTAGAGAAGGGGATTCATGAAAGGAAGAAGTTTCTGGATGTTTATGTAGGATGCTTGCAAGGATCTGACTTTGATTATTTTAATGGTAGCTGCAGCGGCTTCATTGGCATTGGGATAAAATCTGAGGGTATTGAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTTGTTATCAGAGGTGGTAGAAGGATTGAAATCTCTATAGAGATTGTTGTTGGTGATGTTATACCCCTCAATATTGGTAACCAGGTCCCTGCTGATGGAATTTTGATCACTGGTCACTCTCTTGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAAATTGTCCATAAAGATTCTAAGGACCCTTTTTTGATGTCTGGGTGTAAAGTTGCAGATGGCAGTGGTACTATGCTGGTAACTGGTGTTGGTGTTAATACTGAATGGGGGCTTCTAATGGCCAGCATTTCAGAAGACACTGGTGAAGAAACACCTTTGCAGGTTCGCTTAAATGGTGTAGCCACCTTCATCGGTATTGTTGGTCTCTCTGTTGCTGTTGTTGTTCTGATTGTGCTACTGGCCAGCAGATTTTTCTCCGGCCATACCAGAGATGCAAGTGGCAATGTTCAATTTAAAGCAGGGAAGACTAAAGTTGGTGATGCTATTGACGGGGCAATTAAGATAGTAACTGTTGCGGTCACTATTGTAGTGGTTGCAGTACCAGAAGGGCTCCCGTTAGCAGTTACCTTAACACTGGCGTACTCAATGAGGAAAATGATGGCGGATAAAGCTTTGGTGAGGAGGCTTTCCGCTTGTGAGACAATGGGCTATGCAACAACCATTTGCAGTGATAAAACTTGCACGTTGACCATGAATCAGATGACTGAGGTGGAGGCTTATGCTGGTGGGAAGAAGAATGATCCTCCTGGTAACAAGTCAGAGCTCTCTCCCAAGCTCCACTCTTTGCTCATTGAAGGTGTTGCACAGAACACTAATGGCAGTGTTTTTGTCCCTGCGGGTGGTAACGATGTTGAGGTTGCCAGATCACCAACAGAAAAGGCAATTTTACATTGGGGATTAGAGGTCTGTTTTCACAAATTTTATCTCTGTATGCAGGCTGACTCTGAAGTTCACATACACTGGAAAGGTGCTGCTGAGATTGTCCTAGCCTGCTGTACACGGTACATTGATGCAAATGACCAGTTGATAGACATGGATGAGGAAAAGATGGTATCTTTCAGAAAAGCTATTGAAGACATGGCTGCCGAGAGTTTACGTTGTGTTGCCATTGCATATAGAACATTTGAAAAGGAGAATGTTCCAGCCACTGAAGAAGAACGGGCTCACTGGTCTTTACCAGAAGATAATCTTGTTTTGTTAGCTATTGATCCTTGTCGACCTGGAGTCAAAGATTCAGTGGAGCTTTGCCAAAAATCTGGGGTTAAGGTAAAAATGGTCACTCTAATGTCAAAACTGCAAAAGCAATTGCTGTGGAGGAAAAACTTTTCGTGCCATGACAGATGCAGAGATGAAATAGCTGAAGCAATATCAGTAAGAAGACAACAATATTTTCAGGCTCTTAAGAGAGAGAGCATTGAGGAGGAAGGGACATGTGGCTGTCTTGCAATGGGTATTCAAGGAACTGAAGTTACAAAAGAAAGCTCTGATATTATTATTTTGGATGACAATTTTGCTTCAATTGTAAAGGATGTGAGATGGGGACGTTCTGTGTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTAGCAGCTCTTGTTATAAATGTTGTTGCTGCTGTTTCCTCTGGTGATGTCCCACTGAATGCAGTGCAGCTTTTGTGGGTAAATCTTATCATGGATACTTTGGGAGCACTAGCATTGGCAACTGAACCACGAACTGATCACCTTATGGTTGGCCTCCAAGAACCTCTCATAACAAATATTATGTGGAGAAATTTGCTGATACAGGCAATGTACCAAGTATCTGTGTTGCTTGTTCTGAATTTCCGAGTGTTTTTCAGATCATCATCATCTCGGCAAGTTCACTTCAACAGTCAGTTGATCTCTGTCATCATTGGGTTCAGAAGTTGGCCTCTTGCTGTGGTTGGTAAATTTATACCAGTTCCAAATACTCCCATCAACAACGTATTTTCAAGATTGAACCTGAGGCCTCACAATAGCAACATATAG 2607 0.4223 MKEDEQERRNKSATVTNPINNKRQHKLLCLLYPQAALVLNASCRFRYTLDLKKQEEKTQILRKIRAHAQAIRAAYLFKAAGDGQVIETTKPPVASAGEFPIGQEQLASVSREHDTVALQQYGGVAGISNLLKTNLEKGIHERKKFLDVYVGCLQGSDFDYFNGSCSGFIGIGIKSEGIEEGWYDGGSIAFAVILVIVVIRGGRRIEISIEIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGVNTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVVVLIVLLASRFFSGHTRDASGNVQFKAGKTKVGDAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGYATTICSDKTCTLTMNQMTEVEAYAGGKKNDPPGNKSELSPKLHSLLIEGVAQNTNGSVFVPAGGNDVEVARSPTEKAILHWGLEVCFHKFYLCMQADSEVHIHWKGAAEIVLACCTRYIDANDQLIDMDEEKMVSFRKAIEDMAAESLRCVAIAYRTFEKENVPATEEERAHWSLPEDNLVLLAIDPCRPGVKDSVELCQKSGVKVKMVTLMSKLQKQLLWRKNFSCHDRCRDEIAEAISVRRQQYFQALKRESIEEEGTCGCLAMGIQGTEVTKESSDIIILDDNFASIVKDVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPRTDHLMVGLQEPLITNIMWRNLLIQAMYQVSVLLVLNFRVFFRSSSSRQVHFNSQLISVIIGFRSWPLAVVGKFIPVPNTPINNVFSRLNLRPHNSNI 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02027 868 PANTHER CALCIUM-TRANSPORTING ATPASE 819 860 - -
Aip05g02027 868 PANTHER CALCIUM-TRANSPORTING ATPASE 198 498 - -
Aip05g02027 868 Gene3D - 194 268 - -
Aip05g02027 868 Gene3D - 32 79 - -
Aip05g02027 868 PRINTS P-type cation-transporting ATPase superfamily signature 240 254 - -
Aip05g02027 868 PRINTS P-type cation-transporting ATPase superfamily signature 614 624 - -
Aip05g02027 868 PRINTS P-type cation-transporting ATPase superfamily signature 417 431 - -
Aip05g02027 868 PRINTS P-type cation-transporting ATPase superfamily signature 683 695 - -
Aip05g02027 868 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 821 IPR023298 -
Aip05g02027 868 Pfam E1-E2 ATPase 197 395 - -
Aip05g02027 868 PANTHER CATION TRANSPORTING ATPASE 32 143 - -
Aip05g02027 868 PANTHER CATION TRANSPORTING ATPASE 169 198 - -
Aip05g02027 868 PANTHER CATION TRANSPORTING ATPASE 819 860 - -
Aip05g02027 868 PANTHER CATION TRANSPORTING ATPASE 675 809 - -
Aip05g02027 868 PANTHER CATION TRANSPORTING ATPASE 507 622 - -
Aip05g02027 868 PANTHER CATION TRANSPORTING ATPASE 198 498 - -
Aip05g02027 868 SUPERFAMILY Calcium ATPase, transduction domain A 196 289 IPR008250 -
Aip05g02027 868 SUPERFAMILY HAD-like 405 703 IPR036412 -
Aip05g02027 868 Pfam Cation transporting ATPase, C-terminus 744 817 IPR006068 -
Aip05g02027 868 Gene3D - 269 437 - -
Aip05g02027 868 Gene3D - 673 833 - -
Aip05g02027 868 Gene3D - 501 599 IPR023299 GO:0000166
Aip05g02027 868 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 423 604 IPR023299 GO:0000166
Aip05g02027 868 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 358 440 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip05g02027 868 PANTHER CALCIUM-TRANSPORTING ATPASE 32 143 - -
Aip05g02027 868 PANTHER CALCIUM-TRANSPORTING ATPASE 169 198 - -
Aip05g02027 868 PANTHER CALCIUM-TRANSPORTING ATPASE 675 809 - -
Aip05g02027 868 PANTHER CALCIUM-TRANSPORTING ATPASE 507 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02027 Aip-Chr5 69885259 69905356 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02027 802 867 Primary Pumps ATPases AT5G57110 40.909 7.85e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02027 K01537 - gmx:100792945 1009.98