Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02025 ATGCCTCTGACAAGATTAATTTTTAGCAGATTTTTCTCCGGCAATACCAGAGATGCAAGTGGCAATGTTCAATTTAAAGCAGGGAAGACTAAAGTTGGTGATGCTATTGACGGGGCAATTAAGACTACAGTTGGTGATGCTATTGACGGGGCAATTAAGATAGTAACTGTTGCGGTCACTATTGTAGTGGTTGCAGTACCAGAAGGGCTCCCGTTAGCAGTTACCTTAATTCCCTCTGACCTAGTACTTTTACTTCATTCTGTTGCTTACATCGAATTGCAGGTGAGGAGGCTTTCCGCTTGTGAGACAATGGGCTCTGTAACAACCATTTGCAGTGATAAGACTGGCACGTTGACCATGAATCAGGTATGTTGGGATGTATCATTTGAATTTTCATTGGATTCTGGTTTTAGGCAATTTTCATAA 426 0.4155 MPLTRLIFSRFFSGNTRDASGNVQFKAGKTKVGDAIDGAIKTTVGDAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLIPSDLVLLLHSVAYIELQVRRLSACETMGSVTTICSDKTGTLTMNQVCWDVSFEFSLDSGFRQFS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02025 141 SUPERFAMILY HAD-like 99 133 IPR036412 -
Aip05g02025 141 PANTHER CATION TRANSPORTING ATPASE 41 123 - -
Aip05g02025 141 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 105 IPR023298 -
Aip05g02025 141 PANTHER CALCIUM-TRANSPORTING ATPASE 7 41 - -
Aip05g02025 141 PANTHER CALCIUM-TRANSPORTING ATPASE 41 123 - -
Aip05g02025 141 PANTHER CATION TRANSPORTING ATPASE 7 41 - -
Aip05g02025 141 Gene3D - 44 107 - -
Aip05g02025 141 Gene3D - 108 120 IPR023214 -
Aip05g02025 141 ProSitePatterns E1-E2 ATPases phosphorylation site. 113 119 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02025 Aip-Chr5 69722430 69760214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02025 6 123 Primary Pumps ATPases AT5G57110 55.085 8.31e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02025 K01537 - gmx:100820121 123.635