Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02024 ATGCCTCTTTTCTATGAAGTTCTTTCAGGTGTTATACTGAAGAAGGAAGACGAGCAAGAAAGAAGAAACAAGAGTGCCACAGTTACAAACCCCATAAACAATAAAAGGCAACACAAGCTACCTTGTCTTTTTTATCCGCAAGCAGCACTGGTGCTTAATGCTTCTCGTCGATTTCGTTACACCTTGGACTTGAAAAAACAAGAAGAGAAGACACAAATATTGAGAAAGATTAGAGCTCATGCACAAGCCATTAGGCATATCTTTTCAAAACAGCCGGGGATGGTCAAGTGA 291 0.4021 MPLFYEVLSGVILKKEDEQERRNKSATVTNPINNKRQHKLPCLFYPQAALVLNASRRFRYTLDLKKQEEKTQILRKIRAHAQAIRHIFSKQPGMVK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02024 96 Gene3D - 45 89 - -
Aip05g02024 96 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 69 IPR024750 GO:0005516
Aip05g02024 96 PANTHER CATION TRANSPORTING ATPASE 18 87 - -
Aip05g02024 96 PANTHER CALCIUM-TRANSPORTING ATPASE 18 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02024 Aip-Chr5 69715290 69719295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02024 6 88 Primary Pumps ATPases AT4G29900 49.412 6.48e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02024 K01537 - aip:107643612 170.629