Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02008 ATGAGGAAGGACGACGTCATTAGGGATAACCAAGGTAGAATCATTTGCAGGCAACTTGTTTGCAATAAGGAAGGCTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTCACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACAGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCCCCCCACCCCCCAATTTACGCATTTGGTTCTGGCCAATCGTCGTCTCACTGTTACTGA 294 0.4864 MRKDDVIRDNQGRIICRQLVCNKEGWRNMRYLDLDDRSREARSLTRTKCPARLRVKLDYSCGRWKVSCFVESHNHDLTPPHPPIYAFGSGQSSSHCY 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02008 97 Pfam FAR1 DNA-binding domain 9 78 IPR004330 -
Aip05g02008 97 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 79 - -
Aip05g02008 97 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 8 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02008 Aip-Chr5 68658159 68658452 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g02008 FAR1 1.5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02008 - - adu:107488504 174.096