Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02003 ATGAGGGAGAGTCTGAACCCTAAAATCTTAATTCCATCGCTACTGCTATTCTTCTCCTCGCCGCCATTACTGCCAAGTCTCCTCCATCAATGTGTCGCCGGTGGAATTATGAATGGAGGACGAGGTGATCGTGGAGCCTCTCAATTCGTGGAGCTCTTGCCTCTCGGAATAATCTGGAAGGTGAGCGAGCTGGAGACTCTGGAAGCTTCAATTGAAGCTGCGTTCGAAGCTATGAAATCTCGTGAAACTGAGTCATTGAGAGATGAAAAGCAACAGCTTCTTTTGGACATCAGGCGAGCTAACAGACAACCAGCCAACATATCATCCTCGGTATTGTCAAGTGATAGTATGCATATTGGGATTCTTGCGGCAGCTACTCATGATGCTGCAAATAATAGTCCCTTTACCGTTTTTTACAATCCTAGGGCTAGTCCTTCAGAGTTTGTTATTCCTTTAGTTTGTTATTCCTTTAGCCAAGTACTACAAGGTAGTGTTTCTATTCTCCTTTTCAGAGTTTGTGAGATGGAAAAATTCACAATGGTGTAA 546 0.4377 MRESLNPKILIPSLLLFFSSPPLLPSLLHQCVAGGIMNGGRGDRGASQFVELLPLGIIWKVSELETLEASIEAAFEAMKSRETESLRDEKQQLLLDIRRANRQPANISSSVLSSDSMHIGILAAATHDAANNSPFTVFYNPRASPSEFVIPLVCYSFSQVLQGSVSILLFRVCEMEKFTMV 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02003 181 Coils Coil 64 103 - -
Aip05g02003 181 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 87 156 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip05g02003 181 Pfam Auxin response factor 125 159 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aip05g02003 181 PANTHER AUXIN RESPONSE FACTOR 87 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02003 Aip-Chr5 68473408 68476090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02003 86 155 B3 DNA Binding Superfamily AT1G19850 65.714 2.27e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02003 - - qsu:111988787 126.331