Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02001 ATGATCCATGGATTCTTCAAAATTAAGGATGTATTGTATTGCACTCGTATCTTTCAAAGAGTATTTGAGCCAAGGGAATTGGAGTTCTTGATCCTTATATTAGACAAGGCATATACAAGGAATGAAGTTCTGGATATGGAGAAGTTGATGCTGAACACATTGCACTTTAACATGTCTGTTCCAACAGCATATGTTTTCATTAGAAGGTTCCTAAAGGCAGCACAAGCAGACAGAAAGAAGGCTGGGTCAGGGAAACTTATAGGGGTGCATCGGAAGTACCGTTCTTCAAAGCACAACTACACTGCAAAATGTGAAGCAGCAAGTTTTCTTCTTGATAACTCATTGTTGTAG 351 0.3903 MIHGFFKIKDVLYCTRIFQRVFEPRELEFLILILDKAYTRNEVLDMEKLMLNTLHFNMSVPTAYVFIRRFLKAAQADRKKAGSGKLIGVHRKYRSSKHNYTAKCEAASFLLDNSLL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02001 116 Pfam Cyclin, N-terminal domain 24 59 IPR006671 -
Aip05g02001 116 PANTHER CYCLINS 78 110 IPR039361 -
Aip05g02001 116 PANTHER CYCLINS 30 77 IPR039361 -
Aip05g02001 116 PANTHER CYCLIN-B2-1 78 110 - -
Aip05g02001 116 PANTHER CYCLIN-B2-1 30 77 - -
Aip05g02001 116 Gene3D - 54 82 - -
Aip05g02001 116 SUPERFAMILY Cyclin-like 38 75 IPR036915 -
Aip05g02001 116 Gene3D - 8 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02001 Aip-Chr5 68224684 68225280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02001 30 79 Core Cell Cycle Gene Families AT1G76310 76.000 2.85e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02001 K21777 - oeu:111387421 88.5817