Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01998 ATGGCGATTCATCAACAACATGAACCCACTAGTGTTGTCAGTTTCTTCAAGATCATTTGTCGTTGGCATATTCTAGATGAGAAGATTAAGCTTCCAATGGAATTCACAAACAAGTGTGGATTGAAACTCCCAAATCCAGTTATTCTGAAAGTTGTAGATGGCAACCAAAAGAAAGTGCATTGGACCAAAATTAATGGTTCCATTTGGTTTATTGGGAAGGAATGGAAAGAGTTTCTTGAGAACTACTCTGTCTCACACGGTCACCTTTTGTTGTTCAAATATTGTCTTGTGACTTCATACTTTGGGGTCCAAATATTTGACAGCACCACTCTTGAAATTAACTACCCTTACCATGAACTCAACTATGATGATTATGAAGATTATTATGATGAAGATGATGATGATGATGATGAAGATGTTGATGATGTTGTGAAGCTTCAATATGATCAATATCAATTGAAAGATAAAAGTGAGAGTATTGCGGATGCTATAAGAAGTGACAGACTAGAGAGAAAAGATAGCAACCCCAGTTTCGAGGTTGTCATGCCGGATTCATATATCAATGGGGGAAGATGCATGGGAGTACATGAAAGAAGGAGGATACCTACTAAGAGTGGCGGATGGGAGGACATGGAAAGTGATGTACAAGACTTGGAGTGGAGATGGGATGGCTTGCAAGAAGTACAAACTGCAAAAGGGTTGGGCCAAGTTTAG 714 0.3908 MAIHQQHEPTSVVSFFKIICRWHILDEKIKLPMEFTNKCGLKLPNPVILKVVDGNQKKVHWTKINGSIWFIGKEWKEFLENYSVSHGHLLLFKYCLVTSYFGVQIFDSTTLEINYPYHELNYDDYEDYYDEDDDDDDEDVDDVVKLQYDQYQLKDKSESIADAIRSDRLERKDSNPSFEVVMPDSYINGGRCMGVHERRRIPTKSGGWEDMESDVQDLEWRWDGLQEVQTAKGLGQV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01998 237 SUPERFAMILY DNA-binding pseudobarrel domain 10 108 IPR015300 -
Aip05g01998 237 Gene3D - 8 110 IPR015300 -
Aip05g01998 237 PANTHER B3 DOMAIN-CONTAINING 11 148 - -
Aip05g01998 237 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 148 - -
Aip05g01998 237 CDD B3_DNA 14 107 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01998 Aip-Chr5 68167175 68170534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01998 3 160 B3 DNA Binding Superfamily AT1G49475 33.728 2.41e-16 72.8