Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01989 ATGGACACATTTGGATCGGTGGAGCTTGATTTCTCTTCATACACCCAGCATCATCATAGCTCACTCTTCTATGCAACAACCATTGATGCTGCTATGCCTACTATTGTTGGAATGGCACCGAAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCTAAAGAGATCATGAACTTGTGTAATCTAAGGGATGATGCTAAGAAGAAGGTTTATGCCATTATTGACAAGTTCGCCGAAAGAGGCCTTCGTTCCCTAGCCGTTTCAAGACAGGACAGCCCTGGAGCTCCATGGCAGTTTGTTAGTTTGTTGTCACTATTTGATCCACCAAGGCATGACAGTACCGAAACCATTCGCAGGGCTCTTAATCTCGGTGTAAATGTCAAGATGATTACAGGTGATCAACTCGCCATTGCTAAGGAGACAGGCCGAAGACTTGGAATGGGAACAAATATGTACCCATCTGCTTCCCTTCTTGGCCAAGACAAAGATGCAAGTATCACCGCACTTCCCGTCGAAGAGTTGATTGAGAAAGCTGATAGATTTACCGGAGTCTTTCCAGATGCATTGCAAGAAGGGAACCTGGAATCAGCATAA 606 0.4505 MDTFGSVELDFSSYTQHHHSSLFYATTIDAAMPTIVGMAPKNQDAIDAAIVGMLADPKEIMNLCNLRDDAKKKVYAIIDKFAERGLRSLAVSRQDSPGAPWQFVSLLSLFDPPRHDSTETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASITALPVEELIEKADRFTGVFPDALQEGNLESA 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01989 201 PANTHER PLASMA MEMBRANE ATPASE 57 192 - -
Aip05g01989 201 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 57 116 IPR023299 GO:0000166
Aip05g01989 201 SUPERFAMILY HAD-like 103 155 IPR036412 -
Aip05g01989 201 Gene3D - 111 191 IPR023214 -
Aip05g01989 201 PRINTS H+-transporting ATPase (proton pump) signature 182 198 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip05g01989 201 PRINTS H+-transporting ATPase (proton pump) signature 74 92 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip05g01989 201 PANTHER CALCIUM-TRANSPORTING ATPASE 57 192 - -
Aip05g01989 201 PRINTS P-type cation-transporting ATPase superfamily signature 127 137 - -
Aip05g01989 201 PRINTS P-type cation-transporting ATPase superfamily signature 105 116 - -
Aip05g01989 201 Gene3D - 57 110 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01989 Aip-Chr5 67776191 67777648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01989 41 191 Primary Pumps ATPases AT2G24520 61.307 9.98e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01989 K01535 - gmx:100806580 249.98