Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01984 ATGAATTTCGCTGTGCACACCAAGTGTTCGATGCTATTTGATGGTCACAATGGAACTGCTGTTGCTATTTATGCCAAGGAGAATATTCTAAACAACATTTTAAGTGTAATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCATTGCCCAGGGCTTTGGTTGCAGGATTTGTGAAAACTGACAAAGAATTTCAACAGAAAGCACATCAGGTGCAGAGGCTGACTGGGAATCTTCGCATTCTTTACTCTGCACTGGCGAGAGGTCTGATCCCGCTCATAGGGAGGCACTTCTTAAATTCAATAAACATGCTAATGAAACAAATGATATATTCATCCTTGCCGCAAAGGTATATTGACTATCTTTTTTTGGGAGATTATGTTGATAGAGGACAGCACAGCTTGGAAACCATTACCTTGCTGCTTGCACCTAAGATTGAGTATCCTGAGAATGTTCACCTGATACGTGGTAACCATGAAACTGCTGACATAAATGCACTATTTGATTTTCGTATCGAGTGCATTGAAAGGATGCACTCCAAATCATTGAAAAAGCCTCAGGTGCCTTCTTCCCGTATTTGTAGAACTTCTCTCAAGAGCTTCAAAAGCTTGAGGAGTATCGCATGA 627 0.4099 MNFAVHTKCSMLFDGHNGTAVAIYAKENILNNILSVIPSDLNRDEWIAALPRALVAGFVKTDKEFQQKAHQVQRLTGNLRILYSALARGLIPLIGRHFLNSINMLMKQMIYSSLPQRYIDYLFLGDYVDRGQHSLETITLLLAPKIEYPENVHLIRGNHETADINALFDFRIECIERMHSKSLKKPQVPSSRICRTSLKSFKSLRSIA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01984 208 ProSitePatterns Serine/threonine specific protein phosphatases signature. 155 160 IPR006186 GO:0016787
Aip05g01984 208 Gene3D - 96 208 IPR029052 -
Aip05g01984 208 SUPERFAMILY PP2C-like 11 71 IPR036457 -
Aip05g01984 208 Gene3D - 4 84 IPR036457 -
Aip05g01984 208 PRINTS Serine/threonine phosphatase family signature 121 148 IPR006186 GO:0016787
Aip05g01984 208 PRINTS Serine/threonine phosphatase family signature 154 178 IPR006186 GO:0016787
Aip05g01984 208 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 118 180 - -
Aip05g01984 208 Pfam Calcineurin-like phosphoesterase 115 182 IPR004843 GO:0016787
Aip05g01984 208 SUPERFAMILY Metallo-dependent phosphatases 121 181 IPR029052 -
Aip05g01984 208 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 118 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01984 Aip-Chr5 66842264 66845270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01984 12 69 PP2C-type Phosphatase Gene Family AT1G47380 81.034 3.45e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01984 K01090 - ahf:112748460 130.568