Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01983 ATGGAATCCATATTCTGGATCTTCACAAGCATCAAAGTGACGGACAAGGCTTCTATACTTGGGGAAGCCATCAATTACGTGAAACAGCTTCAAGAATGTGTAAAGGAGCTGGAAAAGCAGAACAATGATAATAAGAGGGGCCCAACAGAGCCAGTCATATTCCTCAACAAGACTCAGCTGCTGTGTCGGTACAACGAAGACAGCAGCAGCGAGGAGGAGGAGGAGGTGGAGGAGGATTGGCGTAGCAAGGAGGAAAAACAAGTGCTCCTAGATGTTGAAGCAAGAATGCTGGAGAAGGAGAAGGAGGTGCTGATTGAGATCCACTGCGAGAAAGAGAATGAAATTGAGGTGAAGATATTGGAGCAGCTTGAAGATATTGGTGTTATTTTTGAAAAGGCAACCAGCCTTTTCAAGAATCATTGGAACACCCACATCAAGAAAAAGTTCAAGAAATTGGGAATTGATCCTGTCACACACAAATTACTCTCTAATAACACCACTAACCAAAATCAAATCAAACCAGAACAACCACCACTTTAA 540 0.4296 MESIFWIFTSIKVTDKASILGEAINYVKQLQECVKELEKQNNDNKRGPTEPVIFLNKTQLLCRYNEDSSSEEEEEVEEDWRSKEEKQVLLDVEARMLEKEKEVLIEIHCEKENEIEVKILEQLEDIGVIFEKATSLFKNHWNTHIKKKFKKLGIDPVTHKLLSNNTTNQNQIKPEQPPL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01983 179 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 11 128 - -
Aip05g01983 179 CDD bHLH_AtbHLH_like 14 38 IPR045239 -
Aip05g01983 179 Gene3D - 7 49 IPR036638 GO:0046983
Aip05g01983 179 PANTHER BHLH TRANSCRIPTION FACTOR 11 128 - -
Aip05g01983 179 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 53 IPR036638 GO:0046983
Aip05g01983 179 Coils Coil 20 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01983 Aip-Chr5 66836743 66837872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01983 10 136 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 30.709 1.98e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01983 - - adu:107459735 179.104