Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01979 ATGGCTGACAAAACCCTAAGTTCTTCACCGCCGGAAGCTTCTCAATCGAGCCACCTCATCTATCAACATTATGGTTTCAGATCTGTTTGCTCTGTAGCTACGGTTGCTGCTGCAGTTTCTGCCGCCATTGCTGTCGTAGTTTCCGCCATCGTTGCTGCTGTAGTTGTCGCGTCGAAAGCTTCTGAATCGAGCCACTGTTTCAGATCTGTTTTCTCCTTTGAGCTGCCGCTTGCTTCAGCTCATGGAGAAGATCTTCTTACATCATTAGACAAAGAACTTTCAAGTGACTTTGAGCATCTAGCAGTGGTGAATATGAAACTTCAGGATCCACAGCTGCTAGGTGGATTCGGAGCTGTCTATTTTGCAGAATTGAGAGGCCAAAAAGCAGCAATTAAGAATATGGATGTTCAAGCATCAACAGAGTTTCTTTCAGAGTTGAAGGTCTTAACACATGTTCATCACTTGAATCTGATATTGCGTCGAGGGATATCTTTCCTTGTGTATGAATACATTGAAAATGGAAACTTAAGCCAATATTTGCATGGTACAGGGAGAGAACCTTTGGCATGGTCAACAAGGGTGCAAATTGCTCTGGATTCAGCAAGAGGACTTGAATATATACATAAACACACTGTTCCTATTTATATCCACCGTGATGTGAAACCTGCTAACATATTAATATATAAAGACTTCCATGGAAAGAGGGAAAGGGAACAGCATTGGTGGTCCTTGTCGGACTTGTCGTTGGTTACCACCACTAGTTCCTCAAAGCTTGGAAGAGAGAGTTTCATAGATCTTAACTTCCCTGCCCTAGCCGAAGAAGATGATGCAAGCCAATTTGAGGATTCCGCGATTTCGGATGCAGAGTTTGTGAATCCAACGAAGGTTTTTCTTAGATGA 900 0.43 MADKTLSSSPPEASQSSHLIYQHYGFRSVCSVATVAAAVSAAIAVVVSAIVAAVVVASKASESSHCFRSVFSFELPLASAHGEDLLTSLDKELSSDFEHLAVVNMKLQDPQLLGGFGAVYFAELRGQKAAIKNMDVQASTEFLSELKVLTHVHHLNLILRRGISFLVYEYIENGNLSQYLHGTGREPLAWSTRVQIALDSARGLEYIHKHTVPIYIHRDVKPANILIYKDFHGKREREQHWWSLSDLSLVTTTSSSKLGRESFIDLNFPALAEEDDASQFEDSAISDAEFVNPTKVFLR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01979 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Aip05g01979 299 ProSiteProfiles Protein kinase domain profile. 105 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01979 299 Gene3D Transferase(Phosphotransferase) domain 1 100 264 - -
Aip05g01979 299 Pfam Protein tyrosine and serine/threonine kinase 114 253 IPR001245 GO:0004672|GO:0006468
Aip05g01979 299 SUPERFAMILY Protein kinase-like (PK-like) 114 233 IPR011009 -
Aip05g01979 299 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 36 249 IPR044812 GO:0019199|GO:0045087
Aip05g01979 299 SMART serkin_6 107 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01979 Aip-Chr5 66510437 66515158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01979 88 234 Receptor kinase-like Gene Family AT3G21630 62.338 1.72e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip05g01979 PK_Tyr_Ser-Thr 1.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01979 - K13429 aip:110262853 248.054