Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01978 ATGTTTCCTAATATAAGAGCTCCAAATATCCGTACACTTAGTAAATTTTTTGTTGCCTTTTCATCATACACTACACGCCCGCGCTTCACCTTTCCCCACTTCACCCTTCATCAGAGAAGAAAGGGTCGCACTTTCGCCACTTCACCCTACACCACTCACCTTCGCCCTTCTCCACTCATCGTTGCCCCTCTTCCCCACTCACCACTTCACTTTGCTCACCACTCGTCGCTATTGCCGTTCCTTATCTTCTTCATCTTCGTTTACCATTGTAATCATCGTCGCCGCACCTTTGTTGTCTCTGCACTCACCGTTGCCGCTCACCCTCGTCGTATTTGTGCTCACAGTTGCCGTTCAACCTCATCAGCTCTGCCTTCACCGTTGCCTCTCACCCTCGTCATCTCTGTGTTTATCGTCGCCGGTCGCTCACCATTGTCGTCTCTAAACGCTCAGTATCGTCGTCTCTGCGCTCACCATCGTCGAGAAGGTATATGTATTGATTTTTATTTGGTTTTGAAATTTGGAAGGTCTAGGATTCCGATTGAAGGGTTTTTGATTTGGGGCCTGTCCATAGAGCATGAATTCACCATCGACGAGTTCGTTTCCTTAAGAAGGATGGGTGTGTATATTCTTATCCAGCAGACCAATACGTGGGGAGATAACCTCAAAATTAATGTCAATTTAAGTGCATCCATTCCCTTGATTGATGAAGCCGACATTAAGTTTGATAGTCAGTCAGGGGATGCTTCTCATGGTATCTTGGGAACAAATATCAAATATGACCAAGAAGCACGTAAGATGATTGATATGGTCTATGTGCAGCAATTAGAATCTAGTCATTTGAAGTTGATGCAGCTAGAGCAAGAACTCAAACATGCAAGACAGCAGGTGGTGGATTGGATACTAATCATCTAG 912 0.4518 MFPNIRAPNIRTLSKFFVAFSSYTTRPRFTFPHFTLHQRRKGRTFATSPYTTHLRPSPLIVAPLPHSPLHFAHHSSLLPFLIFFIFVYHCNHRRRTFVVSALTVAAHPRRICAHSCRSTSSALPSPLPLTLVISVFIVAGRSPLSSLNAQYRRLCAHHRREGICIDFYLVLKFGRSRIPIEGFLIWGLSIEHEFTIDEFVSLRRMGVYILIQQTNTWGDNLKINVNLSASIPLIDEADIKFDSQSGDASHGILGTNIKYDQEARKMIDMVYVQQLESSHLKLMQLEQELKHARQQVVDWILII 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01978 303 Coils Coil 275 302 - -
Aip05g01978 303 PANTHER TRANSCRIPTION FACTOR TGA9 194 268 - -
Aip05g01978 303 PANTHER TRANSCRIPTION FACTOR TGA9 270 297 - -
Aip05g01978 303 PANTHER TRANSCRIPTION FACTOR TGA1 194 268 - -
Aip05g01978 303 PANTHER TRANSCRIPTION FACTOR TGA1 270 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01978 Aip-Chr5 66496459 66499629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01978 199 295 Calmodulin-binding Proteins AT5G65210 38.211 6.27e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01978 K14431 - gmx:100793353 119.783