Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01975 ATGAAGCCAACCCTAAAATTCCTGATGAAATTAGGGTTCGCCGGTTCGATTTCCCTCACGTGCCAGAACACTGTGCTACTCGTTTCGAGCGTGGAGGAGACGCTCGTTCCGAAGATCGAGTTCTTGAAATGCTCGGGGCTTTCGGAATCGGAGGTTAATTGCATGGTTGTGAGGTCCCCTGCTTTGTTAACCTACAGTGTAGAGAAGAATTTGAAGCCTAAAGTTGAGTACTTTTTGAATGAGATGAATGGAAAAGTTTCAGAGTTGAAGCGGTTTCCGCCGTATTTTAAATTTGGCTTGGAAGGGAGTATTAAGCCAAGGCATAAGGTGTTGGTTGAGAATGGGGTGAAACCACCGTTGCATCTTATATTGAAGGGTGATGATGGTGGGTTCTATGAAACACTGATTAATACCCGGTTAAGAAAGCTTGATGGAAGGTAG 441 0.4467 MKPTLKFLMKLGFAGSISLTCQNTVLLVSSVEETLVPKIEFLKCSGLSESEVNCMVVRSPALLTYSVEKNLKPKVEYFLNEMNGKVSELKRFPPYFKFGLEGSIKPRHKVLVENGVKPPLHLILKGDDGGFYETLINTRLRKLDGR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01975 146 PANTHER CGI-12 PROTEIN-RELATED 1 144 IPR003690 GO:0003690|GO:0006355
Aip05g01975 146 Gene3D Transcription termination factor 3, mitochondrial 1 144 IPR038538 -
Aip05g01975 146 Pfam mTERF 21 130 IPR003690 GO:0003690|GO:0006355
Aip05g01975 146 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 1 144 - -
Aip05g01975 146 SMART mt_12 53 85 IPR003690 GO:0003690|GO:0006355
Aip05g01975 146 SMART mt_12 86 117 IPR003690 GO:0003690|GO:0006355
Aip05g01975 146 SMART mt_12 17 48 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01975 Aip-Chr5 66449258 66449698 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip05g01975 mTERF 1.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01975 K15032 - twl:120015719 171.4