Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01974 ATGGAAAAAGAACCTCCCAAAACCGAGCAAATACCTGTGGTTGTCATGGCATTTGTTATGAGCGTGTTTTGGATATCTACCGCAGCTGGAGAACTGGGTGATAAAAAGGATTCAGTGACAGCAAGTAAAACCCTAGATTTGACATCTGGTTTTGAAGTTGGCCCAACAACAAATGGTGCATGCGATGCGGTATCATGTCATAGTGCTCGGTCAGTATTGACTATTGCCTTCCAGTTTCCTTTTGACAGTAGTCTGCAGGATAATGTTGCTGTCATGGCATGCCAGTACATCTGTAGTGTGATTTCCTCTGTGCAGAGGGTTGCCATGGCAATTTCTCCATCTAAGTTGCTGAGATCTGATTCTCTCATGGGTGAGTCAGTGCTTAAATATTTGTGGCATCATCAGGATGCCATTTTGTGCTGTTCTTTGAAGTCGGTGCCGGTGTTCATCTTTGCAAACCAGGTTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATGGGTATTTAGAGGAAGGCAGAGAAAGCTAGAAGATACATTCCAAAAGAATTCAAATAGGTTGAAGCTTTTGGGGGGCCAATATTCTTGTAGATAA 609 0.4319 MEKEPPKTEQIPVVVMAFVMSVFWISTAAGELGDKKDSVTASKTLDLTSGFEVGPTTNGACDAVSCHSARSVLTIAFQFPFDSSLQDNVAVMACQYICSVISSVQRVAMAISPSKLLRSDSLMGESVLKYLWHHQDAILCCSLKSVPVFIFANQVGLDMLETTLVALQDITWVFRGRQRKLEDTFQKNSNRLKLLGGQYSCR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01974 202 Pfam MEKHLA domain 115 173 IPR013978 -
Aip05g01974 202 ProSiteProfiles Ig-like domain profile. 113 202 IPR007110 -
Aip05g01974 202 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 115 172 - -
Aip05g01974 202 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 31 115 - -
Aip05g01974 202 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 115 172 IPR044830 GO:0003700
Aip05g01974 202 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 31 115 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01974 Aip-Chr5 66154276 66158022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01974 18 171 Homeobox Transcription Factor Family AT5G60690 53.403 1.47e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01974 K09338 - aip:107640931 238.424