Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01965 ATGTCGCTAGAGTTTAAACTTCTTTTCTTCCCCAACCTTGTTCAGCAACCTATCTCAACTCTCCATGCTGCTCTTGCGGTGCTCTTCGTGGTCACTTGTTTCTTCTGGCTTTCTCCAGGTGGGCTTGCATGGGCCCTGGCAAAGTCCGTTGGTGGGACAGTTATTCCCGGCCCGTCGGGCCTACCTCTACTTGGTCTCCTTCGTGTCTTCATGGGGGAGACACCGCACCGTGTCCTTGCTAAGTTGGCCCAGTCCTTTAGGGCCGATAAGCTCATGGGCTTTTCAGTGGGCTTAACCCGGTTCGTCATCTCAAGCGACCCGGCAACTGCTAAAGAGATTCTGGGAAGCCCAGATTTTGCTGACAGGCCCGTAAAAGAGTCGGCTTACGAGCTCCTCTTCCATAGGGCAATGGGGTTCGCACCGTACGGAGAATACTGGAGGAACCTGAGGAGGATCTCGTCGAGCCACTTGTTCTGTCAGAAGAGGCTCACGGGCTTCGAAGGGTTCAGGAGATCAGTTGGCTTGAACATGGTGAAAGATTTCAAGTCCATGATGGGAGAGAAGGGACACGTTGATGTGAAAAAGGTGCTTCATTTCGGGTCCTTGAACAATGTAATGATGATGGTGTTTGGGAAGTGCTATGAATTTTTGAACGGTAACGATGGTAACGGTGTTATGCTTGAAGAGCTTGTTAGTGAAGGGTATGAGTTGTTGGGTGTTTTTAACTGGAATGACCATTTTCCTGTTCTCGGGTGGATGGACCTTCAGGGTGTGAGGAGAAGGTGTAGGTGTTTGGCTTCAAAGGTGAATGTGTTTGTTGGGAAGATTATAGAGGATCATAGGGTGAAGAGGGTTTCGGGTGAGTATGTTGCTGGTGAAACCGTTGGAGACTTCGTTGATGTCTTGCTTGATTTGGAGAAAGAGAACAAGCTCACTGATTCTGATATGATTGCTGTTCTTTGGGAAATGATTTTCAGAGGAACGGACACAGTGGCCATCTTACTGGAATGGGTACTTGCAAGAATGGTTCTTCATCCAGATATGCAAGCCAAGGCACAAGACGAGATTGATGAAGTGGTTGGGTCAAGGCCGGTTTTGGATATTGACATACCCAACCTGCCTTACCTACAGTGCATTGTGAAGGAGGCCCTAAGGTTACACCCACCGGGGCCACTTCTTTCATGGGCCCGTCTTGCCATACGCGATGTCTTCATTGGGGACAAGCTCGTACCGGCTGGAACCACAGCGATGGTTAACATGTGGGCCATAACGCACAACGAAGATGTGTGGCCGGAACCTGACGTATTCAAGCCGGAGAGATTCATGGAAATTGGAAGAGATGTGAATATAATCGGCTGTGATCTTAGGCTTGCTCCTTTTGGTGCTGGGAGAAGGGTGTGCCCAGGTAAGTCCATGGGCCTGGCCACCGTTCACCTCTGGTTTGCTCAGCTTCTCCAGGGCTTTCAGTGGGTCCCGTGTGAGGAAAAGCCTGTGGACTTGTCTGAGTGCCTCAAGCTTTCAATGGAAATGAAGTCGCCCCTTATTTGCAAAGCTGTTCCTAGGGTTGTTGCTTGA 1575 0.499 MSLEFKLLFFPNLVQQPISTLHAALAVLFVVTCFFWLSPGGLAWALAKSVGGTVIPGPSGLPLLGLLRVFMGETPHRVLAKLAQSFRADKLMGFSVGLTRFVISSDPATAKEILGSPDFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISSSHLFCQKRLTGFEGFRRSVGLNMVKDFKSMMGEKGHVDVKKVLHFGSLNNVMMMVFGKCYEFLNGNDGNGVMLEELVSEGYELLGVFNWNDHFPVLGWMDLQGVRRRCRCLASKVNVFVGKIIEDHRVKRVSGEYVAGETVGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWVLARMVLHPDMQAKAQDEIDEVVGSRPVLDIDIPNLPYLQCIVKEALRLHPPGPLLSWARLAIRDVFIGDKLVPAGTTAMVNMWAITHNEDVWPEPDVFKPERFMEIGRDVNIIGCDLRLAPFGAGRRVCPGKSMGLATVHLWFAQLLQGFQWVPCEEKPVDLSECLKLSMEMKSPLICKAVPRVVA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01965 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Aip05g01965 524 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 Gene3D Cytochrome P450 48 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 SUPERFAMILY Cytochrome P450 55 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PANTHER CYTOCHROME P450 78A5 1 521 - -
Aip05g01965 524 Pfam Cytochrome P450 56 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g01965 524 PANTHER CYTOCHROME P450 78A7-RELATED 1 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01965 Aip-Chr5 64971268 64973222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01965 1 524 Cytochrome P450 AT1G13710 63.910 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01965 K20619 - gmx:100783602 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00998 10 13074098 13076757 Aip05g01965 05 64971268 64973222 PCT