Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01957 ATGGATTCCACCCCTCCGTTTAGTTGTGGTGACGATGACACAGATTGGCTAAGTGAAGAAGATTTTTCTGGTGTGGCTAGCTTTAGTGGGAAGGACGAGGAACCCTCGTTTGAGACTGACTCTGAGGGAGGCGACACGACTGAAGAGGTCCACGGGAACGGATTTGGCGTAGACCCGGTGCCAAGTGACGGGGATGCTCCCGGCTTCAGGTCCACGGAGGATTTTGTGGACCAGGTGTTTAAGACCGAGGAAGAGGCATATGCGGCGTACAAACAATTTGCCCGCTTAAGGGGGTTTGGGGTAAGGAAGGGTGACGTGGCTCGAGTAGACGGTGTTTTGGTGCAGCGAGAATTTTTTTGCCACCGGGAGGGTACAAGGCATGCAAAACACTACGATCGTCCAGACAGAGTCCGAGAGGAGAAGTTGGAGAGTCGCACGGGTTGTACGGCAAAGTTGAAAATTTACTTAGATGCACAAGATCAGGTTTGGAAGGTCAGGAGGATCGACGACAGCCACAACCACCTTCTTGCTGCATCTATGTTTAATCATCTTCTTCCTAGTCATCGGAGTTTGAGCAAGAGCGATAAGGCGCAGGTTGATAGTTTGAAGAAGTTCGGTATAGCCACATCGAAGATTATGGCTTACATGGCCGGGCAGTTAGGGGGGTACGGGATGCTTCGGTTTACCAAAAGAGATCTGTATAACTATGTTCACGGCCAGAGACTGTCTTAA 732 0.5055 MDSTPPFSCGDDDTDWLSEEDFSGVASFSGKDEEPSFETDSEGGDTTEEVHGNGFGVDPVPSDGDAPGFRSTEDFVDQVFKTEEEAYAAYKQFARLRGFGVRKGDVARVDGVLVQREFFCHREGTRHAKHYDRPDRVREEKLESRTGCTAKLKIYLDAQDQVWKVRRIDDSHNHLLAASMFNHLLPSHRSLSKSDKAQVDSLKKFGIATSKIMAYMAGQLGGYGMLRFTKRDLYNYVHGQRLS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01957 243 Pfam FAR1 DNA-binding domain 90 176 IPR004330 -
Aip05g01957 243 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 21 210 - -
Aip05g01957 243 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 210 IPR031052 GO:0006355
Aip05g01957 243 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01957 Aip-Chr5 63684811 63685542 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01957 FAR1 1.3e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01957 - - aip:107640633 495.352