Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01944 ATGACTCACTGGGATGGACTAATGACAAAACCAGGGGAGCGTATCCTTGTTCTTGCTGCAACCAATAGGCCCTTTGACTTGGATGAAGCAATTATTAGGAGATTTGAAAGAAGAAGGCAACACTGCTTGTTACATTACATGCCATTGTTATGGTGTATAACTCTTGATCATTTTGTGGAGAATAGGGGAAAAATTTTGAAAACACTTCTGGCAAAAGAGAAGGTAGACCAAGATCTTGATTTGAAGGAACTTGCAACTATGATGGAAGGATACAGTGGCAGTGACTTGAAGCCATCCATTGATATCAAGACAGTACTATCTCAATTAATGGAAAGGCTTTCACATTATGCTGCATCAAGTGCAGAGGTGTTGCCAGAATTTTCGCAAGTGGAAGCATTTGCCAAATTAAGCAATGCCATTGGCAGGCCATTTGAATAA 438 0.4018 MTHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRRQHCLLHYMPLLWCITLDHFVENRGKILKTLLAKEKVDQDLDLKELATMMEGYSGSDLKPSIDIKTVLSQLMERLSHYAASSAEVLPEFSQVEAFAKLSNAIGRPFE 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01944 145 Gene3D - 59 131 - -
Aip05g01944 145 ProSitePatterns AAA-protein family signature. 15 34 IPR003960 GO:0005524|GO:0016887
Aip05g01944 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 102 IPR027417 -
Aip05g01944 145 Gene3D - 1 45 IPR027417 -
Aip05g01944 145 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 97 - -
Aip05g01944 145 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01944 Aip-Chr5 62011065 62012327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01944 1 96 Calmodulin-binding Proteins AT3G56690 36.735 1.40e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01944 - - aip:107643102 140.198